Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 98.09% Date Mon Jun 7 16:50:03 BST 2021 Rank 65 Aligned Residues 136 % Identity 18% Template c6vddD_ PDB info PDB header:transferase/dna Chain: D: PDB Molecule:dna polymerase i; PDBTitle: pol domain of pol1 from m. smegmatis complex with dna primer-template2 and dntp Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	Q	L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G	Y
Query Conservation
Alig confidence																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	G	S	R	F	G	V	A	V	V	G	T	H	.	K	A	Y	D	A	D	A	T	A	L	A	I	V	A	A	D	G	D	G	R	Y	I	D	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S	S											.		S	S	S											T	T	S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	R	G	L	Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	P	L	T	V	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																	.	.																				.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.																	.	.																				.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	T	L	T	P	E	D	E	A	A	L	A	S	W	L	A	D	.	.	P	G	P	P	K	A	L	H	E	A	K	L	A	M	H	D	L	A	G	.	.	.	.	R	G	W	T	L	R	G	V	T	S	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	S																.	.	S	S	S					S	S										T	.	.	.	.	T	T									.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																	.	.																				.	.	.	.											.
Template SS confidence
										377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.							.
Query SS confidence																																					.							.
Query Sequence		R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	L	.	G	V	P	V	V	N	.	R	H	S	A	I	G	D	A	A	A	T	A	F	C	F	D	M
Query Conservation																																					.							.
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.							.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	T	A	L	A	A	Y	L	V	R	P	G	Q	R	S	F	T	L	D	D	L	A	V	R	Y	L	H	R	E	L	R	Q	A	V	Q	T	V	I	L	R	A	C	A	V	L	D	L	A	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		179	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.

No model constructed - rank, confidence too low

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