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Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.96%DateMon Jun 7 16:50:03 BST 2021
Rank16Aligned Residues162
% Identity17%Templatec6rk6B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:oligoribonuclease; PDBTitle: characterization of an intertidal zone metagenome oligoribonuclease2 and the role of the intermolecular disulfide bond for homodimer3 formation and nuclease activity.
Resolution3.15 Å
Model Dimensions (Å)X:56.068 Y:46.006 Z:34.484

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40....... ..50...
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Query Sequence  AKQLIVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHITVEQL. . . . . . . . AAADPK
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Template Sequence  PNVLVWMDLEMTGLDPEKDRIIEMATIITDGDLRTIAEGPVIVIHQKQELIDGMDEWNTR
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T

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   5....10.........20.........30.........40.........50.........60....
 
   54.....60.........70.........80...... ...90.........100.........110.
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Query Sequence  AMEINGYYERGLYREALTEQQTAVAWGEVQDWL. . RGNTFAGSNPAFDSTIVARQRVTYS
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Template Sequence  THNKTGLVTKVKTSRVTERQAEIETLDFIQRHTLKNRAPLCGNSICQDRRFLYKYMPELS
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   65....70.........80.........90.........100.........110.........120....
 
   112.......120.........130.........140.........150.........160.........170.
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Query Sequence  MPFSPLTVGRVWHHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVNRHSAIGDAAA
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Template Sequence  EWLHYRNVDVSSFKEVARHWAPSI. . . . . . . . . . . . . . . . . . LSGFEKRASHQALDDIKE
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   125....130.........140........ .150.........160......
 
   172.......180.
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Query Sequence  TAFCFDMLRH
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Template Sequence  SIEELRYYRN
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   167..170......
 
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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