Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 97.82% Date Mon Jun 7 16:50:03 BST 2021 Rank 74 Aligned Residues 151 % Identity 11% Template c5n2hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna polymerase; PDBTitle: structure of the e9 dna polymerase exonuclease deficient mutant2 (d166a+e168a) from vaccinia virus Resolution 2.81 Å

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		4	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		Q	L	I	V	V	D	L	E	T	T	G	L	.	.	.	.	D	Y	D	T	A	L	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		S	Y	L	F	L	A	I	A	C	H	F	D	K	K	F	P	S	V	F	I	N	P	I	S	H	T	S	Y	C	Y	I	D	L	S	G	K	R	L	L	F	T	L	I	N	E	E	M	L	T	E	Q	E	I	Q	E	A	V	D	R	G
Template Known Secondary structure													S	S	S				T	T	T													T	T	S										G	G	G	S												T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure												.	.	.	.	.	.	.	.																												.
Query SS confidence												.	.	.	.	.	.	.	.																												.
Query Sequence		Y	Y	E	R	G	L	Y	R	E	A	.	.	.	.	.	.	.	.	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	.	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y
Query Conservation												.	.	.	.	.	.	.	.																												.
Alig confidence												.	.	.	.	.	.	.	.																.												.
Template Conservation																																			.
Template Sequence		C	L	R	I	Q	S	L	M	E	M	D	Y	E	R	E	L	V	L	C	S	E	I	V	L	L	R	I	A	K	Q	L	L	E	.	L	T	F	D	Y	V	V	T	F	N	G	H	N	F	D	L	R	Y	I	T	N	R	L	E	L	L
Template Known Secondary structure						S	S	G	G	G			T	T		S																			.	S			S					S	S	T	T	T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		111	.																							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	S	P	L	T	V	G	R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	E	K	I	I	F	R	S	P	D	K	K	E	A	V	H	L	C	I	Y	E	R	N	Q	S	S	A	N	T	T	F	H	V	N	N	N	N	G	T	I	F	F	D	L	Y	S	F	I	Q	K	S	E	K	L	D	S	Y	K	L
Template Known Secondary structure		S	S								T	T	S																										S	S																	S			S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	A	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	I	S	K	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.

No model constructed - rank, confidence too low

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