Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 99.41% Date Mon Jun 7 16:50:03 BST 2021 Rank 36 Aligned Residues 160 % Identity 14% Template c4q8jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pab-dependent poly(a)-specific ribonuclease subunit pan2; PDBTitle: structure of the saccharomyces cerevisiae pan2-pan3 core complex Resolution 3.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		A	K	Q	L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	E	V	G	L	L	N	V	D	.	.	.	T	G	E	S	L	Y	F	V	P	H	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		S	G	T	L	V	A	I	D	A	E	F	V	S	L	Q	S	E	L	C	E	I	D	H	Q	G	I	R	S	I	I	R	P	K	R	T	A	L	A	R	I	S	I	I	R	G	E	E	G	E	L	Y	G	V	P	F	V	D	D	Y	V
Template Known Secondary structure		S	S												S	S								T	T	S						S															S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		903	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G	Y	Y	E	R	G	L	Y	R	E	A	L	.	.	.	.	.	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	A
Query Conservation																														.	.	.	.	.
Alig confidence						.	.																							.	.	.	.	.															.	.
Template Conservation						.	.																																										.	.
Template Sequence		V	N	T	N	.	.	H	I	E	D	Y	L	T	R	Y	S	G	I	L	P	G	D	L	D	P	E	K	S	T	K	R	L	V	R	R	N	V	V	Y	R	K	V	W	L	L	M	Q	.	.	L	G	C	V	F	V	G	H	G	L	N
Template Known Secondary structure					S	.	.			S	B			T	T	T	S				S			S	S	S				S						T	T	T											.	.		T					B	S	S
Template Predicted Secondary structure						.	.																																										.	.
Template SS confidence
		963	.	.	.			.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.			.	.	1010	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	P	L	T	V	G	R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	.	L	G
Query Conservation																																																											.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	F	K	H	I	N	I	N	V	P	R	N	Q	I	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	I	Y	F	L	Q	G	K	R	Y	L	S	L	R	Y	L	A	Y	V	L	L	G
Template Known Secondary structure								T					T	T	T			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T	S			S	S	S											T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1019	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.																					.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
		157	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	P	V	V	.	N	R	H	S	A	I	G	D	A	A	A	T	A	F	C	F	D	M	L	R	H	T	A	A	A
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		M	N	I	Q	E	G	N	H	D	S	I	E	D	A	H	T	A	L	I	L	Y	K	K	Y	L	H	L	K	E	K
Template Known Secondary structure				S	S	S	S																								S
Template Predicted Secondary structure
Template SS confidence
		1059	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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