Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 78.42% Date Mon Jun 7 16:50:03 BST 2021 Rank 105 Aligned Residues 147 % Identity 11% Template c4o6hA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nucleoprotein; PDBTitle: 2.8a crystal structure of lymphocytic choriomeningitis virus2 nucleoprotein c-terminal domain Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G	Y	Y	E	R	G	L
Query Conservation
Alig confidence										.	.	.	.	.										.	.
Template Conservation										.	.	.	.	.										.	.
Template Sequence		T	W	I	D	I	E	G	R	.	.	.	.	.	F	N	D	P	V	E	I	A	I	.	.	F	Q	P	Q	N	G	Q	F	I	H	F	Y	R	E	P	V	D	Q	K	Q	F	K	Q	D	S	K	Y	S	H	G	M	D	L	A	D	L
Template Known Secondary structure										.	.	.	.	.	T	T								.	.			T	T	T	T										S												T	T
Template Predicted Secondary structure										.	.	.	.	.										.	.
Template SS confidence
		379	380	.	.	.	.	.	.						.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	P	L	T	V	G	R	V	W	H	H
Query Conservation
Alig confidence									.	.	.	.	.	.																						.	.	.
Template Conservation									.	.	.	.	.	.																						.	.	.
Template Sequence		F	N	A	Q	P	G	L	.	.	.	.	.	.	T	S	S	V	I	G	A	L	P	Q	G	M	V	L	S	C	Q	G	S	D	D	.	.	.	I	R	K	L	L	D	S	Q	N	R	K	D	I	K	L	I	D	V	E	M	T	R	E
Template Known Secondary structure		T	T	B		T	T		.	.	.	.	.	.								S		T	T						S	S				.	.	.								T	T		T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.																						.	.	.
Template SS confidence
		432	.	.	.	.	.	.							.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	L	G	V	P	V	V	N	R	H	S	A	I	G	D	A	A	A
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		A	S	R	E	Y	E	D	K	V	W	D	K	Y	G	W	L	C	K	M	H	T	G	I	V	R	D	K	K	K	K	E	I	T	.	.	.	P	H	C	A	L	M	D	C	I	I
Template Known Secondary structure															G	G	G						S					G	G	G					.	.	.
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.				.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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