Return to main results Retrieve Phyre Job Id

Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence38.52%DateMon Jun 7 16:50:03 BST 2021
Rank109Aligned Residues147
% Identity15%Templatec4gveA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:nucleoprotein; PDBTitle: tacaribe nucleoprotein structure
Resolution1.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  IVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHITVEQLAAADPKAMEINGYYERGL
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Template Sequence  IWLDIEGP. . . . . PTDPVELAL. . YQPAKKQYIHCFRKPHDEKGFKNGSRHSHGILMKDI
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   383......390 ......... 400.........410.........420.........430.....
 
   66...70.........80.........90.........100.........110.........120.....
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Query Sequence  YREALTEQQTAVAWGEVQDWLRGNTFAGSNPAFDSTIVARQRVTYSMPFSPLTVGRVWHH
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Template Sequence  EDAVPGV. . . . . . LSYVIGLLPPNMVITTQGSDD. . . IRKLLDIHGRKDLKLIDVKFTSD
Template Known Secondary structure  TTB
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   436...440.. .......450.........460... ......470.........480......
 
   126...130.........140.........150....... ..160.........170.......
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Query Sequence  RLADLAAYAAGKLNIDPTELEGLDAVAERLGV. . . . . PVVNRHSAIGDAAATAFCFD
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Template Sequence  QARQFEHQVWDKFGHLCKQHN. . . . . . . . . GVIISKPSPDEPHCALLDCIMFHSAMS
Template Known Secondary structure  TTTGGG




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   487..490.........500....... ..510.........520.........530....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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