Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 94.09% Date Mon Jun 7 16:50:03 BST 2021 Rank 95 Aligned Residues 130 % Identity 21% Template c3cymA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bad_0989; PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P	H	I	T	V	E	Q	L	A	A	A	D	P	K	A	M	E	I	N	G	Y	Y	E	R	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	A	A	D	A	E	R	A	S	G	F	R	Y	G	H	E	D	W	L	V	Q	F	K	R	D	G	A	G	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	Q	A
Template Known Secondary structure											T	T	T	S	S	S												T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																								70	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	T	F	A	G	S	N	P	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	P	L	T	V	G	R	V	W	H
Query Conservation
Alig confidence																		.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.	.
Template Sequence		L	A	A	A	G	A	D	W	N	D	F	N	R	A	V	G	.	.	.	.	.	.	.	D	A	V	W	I	L	H	D	S	L	Q	D	L	P	G	F	D	E	.	.	.	.	L	G	M	E	P	Q	R	L	F	.	.	.	.	.	.
Template Known Secondary structure					T	T											T	.	.	.	.	.	.	.	T						S	S											.	.	.	.		T								.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.																	.	.	.
Predicted Secondary structure																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A	V	A	E	R	.	L	G	V	P	V	V	N	R	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G
Query Conservation																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.													.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.													.	.
Template Sequence		.	.	.	.	.	.	D	T	E	I	A	A	R	L	L	G	L	K	.	.	R	F	G	L	A	A	V	T	E	H	F	L	G	L	T	L	A	K	E	H	S	A	A	D	W	S	Y	R	P	L	P	R	D	W	R	N	Y	A	A	L
Template Known Secondary structure		.	.	.	.	.	.									T	T		S	.	.	S		S																		T	T			T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.													.	.
Template SS confidence
								118	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	A	T	A	F	C	F	D	M	L	R	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	E	L	L	I	E	L	E	T	K	M	R	A	E
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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