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Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.97%DateMon Jun 7 16:50:03 BST 2021
Rank8Aligned Residues178
% Identity11%Templatec3cm6A_
PDB info PDB header:hydrolase, apoptosisChain: A: PDB Molecule:cell death-related nuclease 4; PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er
Resolution2.60 Å
Model Dimensions (Å)X:48.920 Y:51.018 Z:32.374

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20 .........30 ....... ..40.........50....
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Query Sequence  KQLIVVDLETTGLDYDTA. . . LPVEVGLLNV. . DTGESLY. . . FVPHITVEQLAAADPKA
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Template Sequence  DTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNC
Template Known Secondary structure  S


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   910.........20.........30.........40.........50.........60........
 
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Query Sequence  MEINGYYERGLYREALTEQQTAVAWGEVQDWL. . RGNTFAGSNPAFD. STIVARQRVTYS
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Template Sequence  VDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSN
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   6970.........80.........90.........100.........110.........120........
 
   112.......120.........130.........140.........150.........160. ........170
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Query Sequence  MPFSPLTVGRVWHHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVN. RHSAIGDAA
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Template Sequence  IQMPAFFRQYINLYKIFTNEM. . DRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCL
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   129130.........140......... 150.........160.........170.........180......
 
   171........180..
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Query Sequence  ATAFCFDMLRHT
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Template Sequence  NIATILQRMINM
Template Known Secondary structure  T
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   187..190........
 
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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