Job Description ASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain] Confidence 99.65% Date Mon Jun 7 16:50:03 BST 2021 Rank 32 Aligned Residues 180 % Identity 16% Template c2p51A_ PDB info PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:spcc18.06c protein; PDBTitle: crystal structure of the s. pombe pop2p deadenylation subunit Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	Q	L	I	V	V	D	L	E	T	T	G	L	D	Y	D	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	E	V	G	L	L	N	V	D	T	G	E	S	L	Y	F	V	P
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	P	V	V	S	M	D	T	E	F	P	G	V	V	A	R	P	L	G	V	F	K	S	S	D	D	Y	H	Y	Q	T	L	R	A	N	V	D	S	L	K	I	I	Q	I	G	L	A	L	S	D	E	E	G	N	A	P	V	E	A
Template Known Secondary structure		T	S																		S			S	S	S															S												T	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		41	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90
Predicted Secondary structure						.	.	.	.	.	.														.	.	.																																	.
Query SS confidence						.	.	.	.	.	.														.	.	.																																	.
Query Sequence		H	I	T	V	.	.	.	.	.	.	E	Q	L	A	A	A	D	P	K	A	M	E	I	.	.	.	N	G	Y	Y	E	R	G	L	Y	R	E	A	L	T	E	Q	Q	T	A	V	A	W	G	E	V	Q	D	W	L	R	G	N	.	T
Query Conservation						.	.	.	.	.	.														.	.	.																																	.
Alig confidence						.	.	.	.	.	.														.	.	.																																	.
Template Conservation
Template Sequence		C	T	W	Q	F	N	F	T	F	N	L	Q	D	D	M	Y	A	P	E	S	I	E	L	L	T	K	S	G	I	D	F	K	K	H	Q	E	V	G	I	E	P	A	D	F	A	E	L	L	I	G	S	G	L	V	L	Q	E	E	V	T
Template Known Secondary structure		S						B				T	T	T	S													T	T											B											T	T	T	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	G	S	N	P	A	F	D	S	T	I	V	A	R	Q	R	V	T	Y	S	M	P	F	S	P	L	T	V	G	R	V	W	H	H	R	L	A	D	L	A	A	Y	A	A	G	K	L	N	I	D	P	T	E	L	E	G	L	D	A
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		W	I	T	F	H	S	G	Y	D	F	A	Y	L	L	K	A	M	T	Q	I	P	L	P	A	E	Y	E	E	F	Y	K	I	L	C	I	Y	F	P	K	N	Y	D	I	K	Y	I	M	K	S	V	L	N	.	N	S	K	G	L	Q	D
Template Known Secondary structure					S	S															S				S	S												S	S	S									T	T	T	T		.
Template Predicted Secondary structure																																																						.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.
		151	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	A	E	R	L	G	V	P	V	V	N	.	R	H	S	A	I	G	D	A	A	A	T	A	F	C	F	D	M	L	R	H	T
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		I	A	D	D	L	Q	I	H	R	I	G	P	Q	H	Q	A	G	S	D	A	L	L	T	A	R	I	F	F	E	I	R	S	R
Template Known Secondary structure						T	T					S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Michael Sternberg   Disclaimer Terms and Conditions		Phyre2 is part of Genome3D