Return to main results Retrieve Phyre Job Id

Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence100.00%DateMon Jun 7 16:50:03 BST 2021
Rank4Aligned Residues166
% Identity23%Templatec2p1jB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii exonuclease domain2 from thermotoga maritima
Resolution2.50 Å
Model Dimensions (Å)X:46.449 Y:56.023 Z:42.688

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60...
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  QLIVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHITVEQLAAADPKAMEINGYYER
Query Conservation    
 

 




      




 
                            
 


  
Alig confidence 








































.

















Template Conservation 
 
 

 



       




 
                .             


  
Template Sequence  TFVVLDFETTGLDPQVDEIIEIGAVKIQGGQIVDEYHTLIK. PSREISRKSSEITGITQE
Template Known Secondary structure 
SSS
TTT

TT

.
SS





Template Predicted Secondary structure 












.









Template SS confidence 



























































   357..360.........370.........380.........390....... ..400.........410.....
 
   64.....70.........80.........90.........100.........110.........120...
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  GLYREALTEQQTAVAWGEVQDWLRGNTFAGSNPAFDSTIVARQRVTYSMPFSPLTVGRVW
Query Conservation   
                                

   
                    
Alig confidence 








....














































Template Conservation           ....                  
   
   
                    
Template Sequence  MLENKRSIE. . . . EVLPEFLGFLEDSIIVAHNANFDYRFLRLWIKKVMGLDWERPYIDTL
Template Known Secondary structure  TT


....
SS
TT






Template Predicted Secondary structure 



....

















Template SS confidence 



























































   416...420.... .....430.........440.........450.........460.........470.
 
   124.....130.........140.........150.........160.........170.........180...
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  HHRLADLAAYAAGKLNIDPTELEGLDAVAERLGVPVVNRHSAIGDAAATAFCFDMLRHTA
Query Conservation                          
  
    

     
 

 

  
  
   
    
Alig confidence  ...........
















































Template Conservation  ...........             
  
    

     
 

 

  
  
   
    
Template Sequence  . . . . . . . . . . . ALAKSLLKLRSYSLDSVVEKLGLGPFRHHRALDDARVTAQVFLRFVEMM
Template Known Secondary structure  ...........


S


T





S
T
Template Predicted Secondary structure  ...........















Template SS confidence 



























































   472.......480.........490.........500.........510.........520
 
   184.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  AA
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  KK
Template Known Secondary structure  TS
Template Predicted Secondary structure 
Template SS confidence 

   521.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D