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Job DescriptionASR85459.1_DNA_polymerase_II_exonuclease_[Mycobacterium_phage_Cain]
Confidence99.90%DateMon Jun 7 16:50:03 BST 2021
Rank29Aligned Residues146
% Identity19%Templatec2is3B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ribonuclease t; PDBTitle: crystal structure of escherichia coli rnase t
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  IVVDLETTGLDYDTALPVEVGLLNVDTGESLYFVPHITVEQLAAADPKAMEINGYYERGL
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Template Sequence  VVIDVETLEIAAITLKXDEQGWLXPD. . . . TTLHFHVEPG. . . . . . . . . . . . AVSEYEAL
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   20.........30.........40..... ....50..... ....60...
 
   66...70.........80.........90.........100.........110.........120.....
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Query Sequence  YREALTEQQTAVAWGEVQDWLRGNTFAGSNPAFDSTIVARQRVTYSMPFSPLTVGRVWHH
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Template Sequence  HEIFKVVRKGIKA. . . . . SGCNRAIXVAHNANFDHSFXXAAAERASLKRNPFHPFATFD.
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TTTT
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   126...130.........140.........150...... ...160.........170.........180..
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Query Sequence  RLADLAAYAAGKLNIDPTELEGLDAVAERLG. . VPVVNRHSAIGDAAATAFCFDMLRHT
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Template Sequence  . . . . . . . . . TAALAGLALGQTVLSKACQTAGXDFDSTQAHSALYDTERTAVLFCEIVNR
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STT



GGGGG
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   151........160.........170.........180.........190.........200
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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