BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (281 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9ZWZ8 Gp82 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZWZ... 205 2e-51 UniRef50_A1UPK2 Putative uncharacterized protein n=1 Tax=Mycobac... 176 6e-43 UniRef50_C1BE54 Hypothetical membrane protein n=1 Tax=Rhodococcu... 80 8e-14 UniRef50_B4F338 Putative bacteriophage excisionase n=2 Tax=Rhodo... 77 7e-13 UniRef50_D0YT23 Gp35 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT... 76 1e-12 UniRef50_Q0RUX8 Possible mycobacteriophage excisionase n=3 Tax=R... 61 3e-08 UniRef50_Q3L913 Hypothetical membrane protein n=2 Tax=Rhodococcu... 56 1e-06 UniRef50_UPI0001AF6E76 phage excisionase n=1 Tax=Mycobacterium k... 51 4e-05 UniRef50_UPI0001BC2C5D hypothetical protein BlinB_03557 n=1 Tax=... 49 1e-04 UniRef50_B2HFL8 Phage excisionase n=1 Tax=Mycobacterium marinum ... 47 6e-04 UniRef50_Q06GE1 Putative transmembrane protein n=1 Tax=Rhodococc... 46 0.002 UniRef50_Q5Z1Z3 Putative phage recombinase n=1 Tax=Nocardia farc... 46 0.002 UniRef50_Q0RMB7 Putative uncharacterized protein n=1 Tax=Frankia... 45 0.003 UniRef50_B8HHK6 Putative uncharacterized protein n=1 Tax=Arthrob... 44 0.005 UniRef50_A4TG29 Putative uncharacterized protein n=1 Tax=Mycobac... 44 0.008 UniRef50_B7GRA6 Putative uncharacterized protein n=1 Tax=Bifidob... 42 0.022 UniRef50_C5EA24 ABC-type branched-chain amino acid transport sys... 41 0.032 UniRef50_D2Q9S7 Putative uncharacterized protein n=2 Tax=Bifidob... 41 0.038 UniRef50_B8HIX1 Putative Trp operon repressor n=1 Tax=Arthrobact... 40 0.075 UniRef50_Q70K80 Putative mycobacteriophage excisionase n=1 Tax=G... 40 0.077 UniRef50_A0Q9G2 Putative uncharacterized protein n=1 Tax=Mycobac... 40 0.098 >UniRef50_Q9ZWZ8 Gp82 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZWZ8_BPMT4 Length = 259 Score = 205 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 150/291 (51%), Positives = 174/291 (59%), Gaps = 48/291 (16%) Query: 1 MSTHKT-----PRESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPL 55 MS H T P+E+ATRFF WL A T+ASILGNVTHA+L + + + AAA + Sbjct: 1 MSNHTTTSESSPQEAATRFFWAWLIAATAASILGNVTHAVLGAASSPLIAAAAAIVPP-V 59 Query: 56 ALLGATHGVHKLVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAF 115 LLGATHGVH LV+SRI+G AY A+L I VA+A AF LSF ALRELA+V G+ P+IA+ Sbjct: 60 VLLGATHGVHALVRSRIVGAAYRAALTIVVALAVCAFVLSFEALRELAIVHAGMRPSIAW 119 Query: 116 LVPLVIDLSITGSTIALLALSSAERA----EVQH-DAQPVHVAAQPVHTETHLVAHEADG 170 L PL IDLSITGST+ALLAL+ R EV+H DA P+ A PVH H Sbjct: 120 LWPLAIDLSITGSTVALLALTGQARGAQAYEVEHLDAHPLSPVA-PVHVSVHT------- 171 Query: 171 LVHVTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDE 230 A A LP++ AA RL+D Sbjct: 172 --------------SAQAVAQAAAVDVAEPATDLPVE---------------AAERLLDA 202 Query: 231 GVTRIDRAKVAQVLAEHAEGTAPSMIARKLQVGYSTVVRILDHHTAQEVNA 281 GVTRIDR KVAQVLAEHAEGTAPSMIARKL VGYSTVVRIL+HHTA A Sbjct: 203 GVTRIDRVKVAQVLAEHAEGTAPSMIARKLSVGYSTVVRILEHHTAHAAQA 253 >UniRef50_A1UPK2 Putative uncharacterized protein n=1 Tax=Mycobacterium sp. KMS RepID=A1UPK2_MYCSK Length = 350 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 69/184 (37%), Positives = 97/184 (52%), Gaps = 7/184 (3%) Query: 11 ATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKLVQS 70 AT FF GWL S S+ GNV HALL + +AA A V P+ LL ATH LV++ Sbjct: 15 ATAFFLGWLILAASMSLAGNVGHALLIAPVEMGWLAAGAALVPPIVLLAATHSATWLVRA 74 Query: 71 RIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 R G Y L +T A+A +FALSF ALR AVV G+ +++++ P VID++I +T+ Sbjct: 75 RSAGWVYWTCLALTAALAVGSFALSFDALRSFAVVL-GIRESLSWIWPAVIDVAIAHATL 133 Query: 131 ALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVH------VTAQPVHEPVR 184 LL+++ R E ++ P + V+ EA G+V +A PV P Sbjct: 134 CLLSMARPARVESFSTSRAAAAVGAPELSVPVAVSAEASGVVRDGVDDAQSANPVSAPGP 193 Query: 185 GVTV 188 G V Sbjct: 194 GPAV 197 >UniRef50_C1BE54 Hypothetical membrane protein n=1 Tax=Rhodococcus opacus B4 RepID=C1BE54_RHOOB Length = 390 Score = 79.9 bits (195), Expect = 8e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 +Q R + A + ++ I + + + AF LSFA R+LA+ G+ + ++ P ++D +I G Sbjct: 11 IQVRALIAALIVAISIAIGITTGAFVLSFAVQRDLAL-QAGIPHYLTWIFPAIVDGAILG 69 Query: 128 STIALLALSS 137 +TIA++ALS Sbjct: 70 ATIAVVALSK 79 >UniRef50_B4F338 Putative bacteriophage excisionase n=2 Tax=Rhodococcus equi RepID=B4F338_COREQ Length = 382 Score = 76.8 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 13 RFFRGWLAAGTSASILGNVTHALLD-SDAGSPVVAAALAAVAPLALLGATHGVHKLVQS 70 RFF LA SI GN HA + + P++AAA++ + P++LL A+HG+ L ++ Sbjct: 154 RFFWTVLAVAAGVSIAGNALHAWVSHAPDFDPLLAAAISTIPPISLLAASHGLTILART 212 Score = 48.7 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A+ A+L +T + ++F LSF AL +L + G +++L P++ID +I +TI++L L Sbjct: 85 AFWAALTLTSMICLASFILSFVALADL-LHMTGQPRELSYLFPVIIDGTILQATISILWL 143 Query: 136 SS 137 + Sbjct: 144 AG 145 >UniRef50_D0YT23 Gp35 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT23_9ACTO Length = 299 Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Query: 81 LWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 L++T+ +A +F LSF+ L + ++ G P +A++ PL ID I +TIA++A S Sbjct: 2 LFLTIVLAVGSFVLSFSGLYDFSLT-CGYHPWLAWIWPLTIDGVIVAATIAVVAFSR 57 >UniRef50_Q0RUX8 Possible mycobacteriophage excisionase n=3 Tax=Rhodococcus RepID=Q0RUX8_RHOSR Length = 448 Score = 61.4 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 +Q R + A + ++ I V + + AF LSFA R+LA+ G+ + ++ P ++D +I G Sbjct: 11 IQLRALIAALIVAIAIAVGITTGAFVLSFAVQRDLAL-QAGIPHYLTWIFPAIVDGAILG 69 Query: 128 STIALLALSS 137 +TIA++ALS Sbjct: 70 ATIAIVALSK 79 >UniRef50_Q3L913 Hypothetical membrane protein n=2 Tax=Rhodococcus erythropolis RepID=Q3L913_RHOE4 Length = 455 Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 12/204 (5%) Query: 86 AVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS---AERAE 142 + + AF LSFA R+LA + + ++ P ++D +I G+TIA++ +S ++R Sbjct: 47 GITTGAFVLSFAVQRDLA-RQALIPEHLTWIFPAIVDSAILGATIAIVIISKLNMSKRDR 105 Query: 143 VQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAE 202 + A V V + + H A + + A A A Sbjct: 106 GFYIALAVSVVVISILGNAYHAYHAAI-AAREFISGGGDLGFSPLAPAIAAAIAIIPPAL 164 Query: 203 PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSM------- 255 L + A +V+ G D A LA + P Sbjct: 165 VLAFTHGITVLVKAVGMAYAAYREIVETGTATDDAMDTASDLAADRDPMQPDFRDSVTRK 224 Query: 256 IARKLQVGYSTVVRILDHHTAQEV 279 IA +L+ ++T + HT Sbjct: 225 IAEQLETEHTTDATVDASHTNHPA 248 >UniRef50_UPI0001AF6E76 phage excisionase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6E76 Length = 297 Score = 51.4 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 7/190 (3%) Query: 71 RIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 R++ + AS+W+TV +A+ +F LSF +LR LA + ++L PL++D I +T+ Sbjct: 65 RLVIRSRTASVWLTVFIATISFVLSFNSLRSLAAMTA-WPGWPSWLSPLLVDGVIILATL 123 Query: 131 ALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVAD 190 +++L+ RA+ + V V T V G Sbjct: 124 VIVSLA-PYRAQFWNRVFLWTVLGVGALVS---VGGNGLHAWLSTGHLVSWMRWGSAGLA 179 Query: 191 LIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEG 250 + A A L + P + V R ++ R+DR + A H EG Sbjct: 180 CVPPVALLATTHILGILWRFDPVPPPDARSQV-RDRALELAAQRMDRWEAAAA-KLHEEG 237 Query: 251 TAPSMIARKL 260 PS+ K+ Sbjct: 238 YCPSVPTDKM 247 Score = 46.0 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 14 FFRGWLAAGTSASILGNVTHALLDSD---AGSPVVAAALAAVAPLALLGATHGVHKLVQ 69 F L G S+ GN HA L + + +A LA V P+ALL TH + L + Sbjct: 140 FLWTVLGVGALVSVGGNGLHAWLSTGHLVSWMRWGSAGLACVPPVALLATTHILGILWR 198 >UniRef50_UPI0001BC2C5D hypothetical protein BlinB_03557 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2C5D Length = 283 Score = 49.5 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 74 GGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALL 133 G + + + T+ +A AF LSF AL +LA G+A + A++ PL++D I +TIA++ Sbjct: 8 GWSVITAACGTIGIALGAFWLSFTALADLA-RRSGIASSQAWVWPLLVDGLIVVATIAVV 66 Query: 134 ALSSAE 139 AL Sbjct: 67 ALDGRA 72 >UniRef50_B2HFL8 Phage excisionase n=1 Tax=Mycobacterium marinum M RepID=B2HFL8_MYCMM Length = 201 Score = 47.2 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAG-SPVVAAALAAVAPLALLGATHGVHK 66 + + FF LA AS+ N HA++ +P + AA+ V P++LL HG Sbjct: 43 QRANRSFFWWVLALAAMASVGSNALHAIVAPGNELAPWLKAAIGVVPPVSLLATAHGAAI 102 Query: 67 LVQSR 71 L + R Sbjct: 103 LSRIR 107 >UniRef50_Q06GE1 Putative transmembrane protein n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GE1_9NOCA Length = 379 Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Query: 86 AVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 + + AF LSF+ L++LA V G + A++ P ++D I G+TIA++ LS Sbjct: 29 GITTGAFILSFSVLKDLA-VQGMLPAEHAWIFPAIVDGGILGATIAVIVLSK 79 >UniRef50_Q5Z1Z3 Putative phage recombinase n=1 Tax=Nocardia farcinica RepID=Q5Z1Z3_NOCFA Length = 207 Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 69 QSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGS 128 QS+ + A +++ + +A+ +AF LSFAALR+LA+ +A+L P+++D +I + Sbjct: 7 QSKGVRWARWSAVLVVLAIGGAAFVLSFAALRDLAI-KAHTPTHLAWLFPVIVDGTIIQA 65 Query: 129 TIALLALS 136 TIA+LAL+ Sbjct: 66 TIAVLALA 73 >UniRef50_Q0RMB7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RMB7_FRAAA Length = 327 Score = 44.8 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 2/124 (1%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAG-SPVVAAALAAVAPLALLGATHGVHK 66 R R L S+ N HAL+ A S + L+A P+A+LG+ H Sbjct: 7 RSRPLRLPLTMLIFSLGMSVFANGEHALIYHRAQLSAWASVLLSATPPVAVLGSLHMQLS 66 Query: 67 LVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSIT 126 G +T AV + +FALSF L ++ ++ G+ A++ P +DL Sbjct: 67 PFGQPGSSGQRYGDWALTGAVFALSFALSFETLWQIGLII-GLDHHFAWMFPAGLDLVAV 125 Query: 127 GSTI 130 + + Sbjct: 126 RAAV 129 >UniRef50_B8HHK6 Putative uncharacterized protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HHK6_ARTCA Length = 206 Score = 44.1 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Query: 84 TVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAER 140 TV +A AF LSFA+L +LA G+ ++++ P+++D I +T+A++AL+ +R Sbjct: 23 TVLIAVGAFVLSFASLTDLA-ARSGIDRNLSWIWPIIVDGLIVAATVAIVALAGHDR 78 >UniRef50_A4TG29 Putative uncharacterized protein n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TG29_MYCGI Length = 349 Score = 43.7 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 13 RFFRGWLAAGTSASILGNVTHALLDSDAGS-PVVAAALAAVAPLALLGATHGVHKLVQSR 71 R+F LA SI GN H L D P +AA +AAVAPL+LL HG +++ Sbjct: 119 RYFWAVLAISAIISIGGNALHGYLPPDTALWPWLAACIAAVAPLSLLATVHGAATMLRIS 178 Query: 72 I 72 Sbjct: 179 A 179 Score = 41.8 bits (96), Expect = 0.029, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A + ++ IT VA+++F LSFA+L +LA G +A L P+++DL+I +T+A++ L Sbjct: 49 ACIVAVLITAVVAAASFVLSFASLADLA-QRSGYPAELAKLWPVIVDLTIVLATVAVIVL 107 Query: 136 SSAERAEVQH 145 A H Sbjct: 108 GPAGVGSRAH 117 >UniRef50_B7GRA6 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GRA6_BIFLI Length = 220 Score = 42.1 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 77 YVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 + + V +A AF +SF ALR + + G+ A+A++ P++ID S T A A Sbjct: 1 MWPGVTVAVVLALLAFIISFDALRAVGLA-CGINAALAWMFPIIIDGSTLAFTWAAWAF 58 >UniRef50_C5EA24 ABC-type branched-chain amino acid transport system protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=C5EA24_BIFLO Length = 373 Score = 41.4 bits (95), Expect = 0.032, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKLVQSR 71 L + S+ GN HA L++ P A A+ ++ P+ALL +TH + + R Sbjct: 66 WAGLVLFSLFSVTGNALHAWLNAGGMLPTWGAPAIMSIPPIALLYSTHLIVIIAGDR 122 Score = 41.0 bits (94), Expect = 0.052, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 81 LWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 + + V +A AF LSF ALR L V G+ P +++ PL +D +I T A Sbjct: 1 MTVGVMIAVIAFVLSFDALR-LVFVSSGINPLLSWGGPLCVDGTILLCTWATWGFRK 56 >UniRef50_D2Q9S7 Putative uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=D2Q9S7_9BIFI Length = 411 Score = 41.4 bits (95), Expect = 0.038, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 77 YVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALS 136 + + + AF LSF ALR L V G+ P +++ P+ +D +I T A Sbjct: 19 MWPGITAGLVIGLIAFILSFDALR-LVFVSCGINPYLSWGGPVCVDGTILLCTWATWGFK 77 Query: 137 S 137 Sbjct: 78 K 78 Score = 40.6 bits (93), Expect = 0.064, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKLVQSRI 72 L + SI GN HAL+++ P A + ++ P+A+L ATH + + R+ Sbjct: 88 WAGLVLFSGCSIGGNALHALINNGLELPAWAPATIMSIPPVAMLYATHLIVIIAGDRL 145 >UniRef50_B8HIX1 Putative Trp operon repressor n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HIX1_ARTCA Length = 250 Score = 40.2 bits (92), Expect = 0.075, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 80 SLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAE 139 SL + +A ++F LSF L + A W G+ + +LVP+V+D +I A+ A Sbjct: 16 SLALVGVLALASFTLSFLGLIQ-AAAWAGIPEYLRWLVPIVVDSTIL--VYAVAASVQRA 72 Query: 140 RAEV 143 R E Sbjct: 73 RGES 76 >UniRef50_Q70K80 Putative mycobacteriophage excisionase n=1 Tax=Gordonia westfalica RepID=Q70K80_9ACTO Length = 292 Score = 40.2 bits (92), Expect = 0.077, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAG---SPVVAAALAAVAPLALLGATHGV 64 ++ R+ LA ++ S+ GN HA L + ++A A+A VAPLALL + HG+ Sbjct: 85 DAGKRYHFSMLAIFSTVSVAGNAGHAYLAAGDQGVAHGLMAVAIAMVAPLALLASIHGL 143 >UniRef50_A0Q9G2 Putative uncharacterized protein n=1 Tax=Mycobacterium avium 104 RepID=A0Q9G2_MYCA1 Length = 394 Score = 39.8 bits (91), Expect = 0.098, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 89/241 (36%), Gaps = 17/241 (7%) Query: 15 FRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKLVQSRIIG 74 F L T+ S+ GNV +A+ V+ ALAAVAP+ L H + K + R Sbjct: 88 FTRLLLGCTTVSLAGNVAYAVERGAVTP--VSIALAAVAPILLPVGVHFIPKAARVRR-- 143 Query: 75 GAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLA 134 GA + A +AF LSF AL L + G A+L+P+ ID+ + AL+ Sbjct: 144 GARFVVTVAVIVAAVAAFVLSFEALSGL-MRMRGHDGWTAYLLPVAIDVLAAAAAYALVV 202 Query: 135 LSSAERAEVQHDAQPVHVA---AQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADL 191 A R E + A A+P T T + L T EP Sbjct: 203 EPDAVREEAPVTQRVEAPAMRDAEPAPTATQTPSVRDAELATHTDATPEEPATQPDALR- 261 Query: 192 IAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGT 251 A E +P+ S D A + R + T R Q A A T Sbjct: 262 ------DADTEEIPVTCSDSRDAAAKQGTESSTTRRLAAVPT--PRPAATQTAASPATQT 313 Query: 252 A 252 A Sbjct: 314 A 314 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_UPI0001AF6E76 phage excisionase n=1 Tax=Mycobacterium k... 181 2e-44 UniRef50_Q9ZWZ8 Gp82 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZWZ... 176 6e-43 UniRef50_Q3L913 Hypothetical membrane protein n=2 Tax=Rhodococcu... 167 4e-40 UniRef50_A1UPK2 Putative uncharacterized protein n=1 Tax=Mycobac... 155 2e-36 UniRef50_C1BE54 Hypothetical membrane protein n=1 Tax=Rhodococcu... 116 8e-25 UniRef50_Q0RUX8 Possible mycobacteriophage excisionase n=3 Tax=R... 101 2e-20 UniRef50_Q06GE1 Putative transmembrane protein n=1 Tax=Rhodococc... 95 3e-18 UniRef50_B4F338 Putative bacteriophage excisionase n=2 Tax=Rhodo... 90 6e-17 UniRef50_D0YT23 Gp35 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT... 85 3e-15 UniRef50_UPI0001BC2C5D hypothetical protein BlinB_03557 n=1 Tax=... 73 2e-11 UniRef50_B2HFL8 Phage excisionase n=1 Tax=Mycobacterium marinum ... 70 1e-10 UniRef50_Q5Z1Z3 Putative phage recombinase n=1 Tax=Nocardia farc... 64 6e-09 Sequences not found previously or not previously below threshold: UniRef50_C5EA24 ABC-type branched-chain amino acid transport sys... 61 5e-08 UniRef50_B7GRA6 Putative uncharacterized protein n=1 Tax=Bifidob... 61 5e-08 UniRef50_A4TG29 Putative uncharacterized protein n=1 Tax=Mycobac... 61 5e-08 UniRef50_D2Q9S7 Putative uncharacterized protein n=2 Tax=Bifidob... 59 2e-07 UniRef50_Q70K80 Putative mycobacteriophage excisionase n=1 Tax=G... 58 4e-07 UniRef50_B8HHK6 Putative uncharacterized protein n=1 Tax=Arthrob... 55 3e-06 UniRef50_B8HIX1 Putative Trp operon repressor n=1 Tax=Arthrobact... 54 7e-06 UniRef50_C7NLQ5 Putative uncharacterized protein n=2 Tax=Microco... 51 6e-05 UniRef50_Q0RMB7 Putative uncharacterized protein n=1 Tax=Frankia... 50 1e-04 UniRef50_Q2FSQ8 Putative transcriptional regulator, AsnC family ... 48 3e-04 UniRef50_D0LFE9 Putative uncharacterized protein n=1 Tax=Gordoni... 48 5e-04 UniRef50_D1SIS3 Putative uncharacterized protein n=1 Tax=Micromo... 43 0.010 UniRef50_D1S9S3 Putative uncharacterized protein n=1 Tax=Micromo... 43 0.016 UniRef50_B0P7M9 Putative uncharacterized protein n=1 Tax=Anaerot... 41 0.040 UniRef50_A7TUS9 Putative uncharacterized protein n=4 Tax=Strepto... 41 0.046 UniRef50_C9YVA9 Putative membrane protein n=1 Tax=Streptomyces s... 41 0.057 UniRef50_C5C9M1 Putative uncharacterized protein n=1 Tax=Microco... 41 0.057 UniRef50_O64228 Gene 34.1 protein n=5 Tax=Siphoviridae RepID=VG3... 41 0.059 UniRef50_Q6AIX7 Related to transport protein TolQ n=1 Tax=Desulf... 40 0.078 UniRef50_Q6XMV8 Putative uncharacterized protein n=1 Tax=Rhodoco... 40 0.084 >UniRef50_UPI0001AF6E76 phage excisionase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6E76 Length = 297 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 7/190 (3%) Query: 71 RIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 R++ + AS+W+TV +A+ +F LSF +LR LA + ++L PL++D I +T+ Sbjct: 65 RLVIRSRTASVWLTVFIATISFVLSFNSLRSLAAMTA-WPGWPSWLSPLLVDGVIILATL 123 Query: 131 ALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVAD 190 +++L+ RA+ + V V T V G Sbjct: 124 VIVSLA-PYRAQFWNRVFLWTVLGVGALVS---VGGNGLHAWLSTGHLVSWMRWGSAGLA 179 Query: 191 LIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEG 250 + A A L + P + V R ++ R+DR + A H EG Sbjct: 180 CVPPVALLATTHILGILWRFDPVPPPDARSQV-RDRALELAAQRMDRWEAAAA-KLHEEG 237 Query: 251 TAPSMIARKL 260 PS+ K+ Sbjct: 238 YCPSVPTDKM 247 Score = 74.2 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 11 ATRFFRGWLAAGTSASILGNVTHALLDSD---AGSPVVAAALAAVAPLALLGATHGVHKL 67 F L G S+ GN HA L + + +A LA V P+ALL TH + L Sbjct: 137 NRVFLWTVLGVGALVSVGGNGLHAWLSTGHLVSWMRWGSAGLACVPPVALLATTHILGIL 196 Query: 68 VQ 69 + Sbjct: 197 WR 198 >UniRef50_Q9ZWZ8 Gp82 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZWZ8_BPMT4 Length = 259 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 147/291 (50%), Positives = 171/291 (58%), Gaps = 48/291 (16%) Query: 1 MSTHKT-----PRESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPL 55 MS H T P+E+ATRFF WL A T+ASILGNVTHA+L + + + AAA + Sbjct: 1 MSNHTTTSESSPQEAATRFFWAWLIAATAASILGNVTHAVLGAASSPLIAAAAAIVPP-V 59 Query: 56 ALLGATHGVHKLVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAF 115 LLGATHGVH LV+SRI+G AY A+L I VA+A AF LSF ALRELA+V G+ P+IA+ Sbjct: 60 VLLGATHGVHALVRSRIVGAAYRAALTIVVALAVCAFVLSFEALRELAIVHAGMRPSIAW 119 Query: 116 LVPLVIDLSITGSTIALLALSSAERAEVQH-----DAQPVHVAAQPVHTETHLVAHEADG 170 L PL IDLSITGST+ALLAL+ R + DA P+ A PVH H Sbjct: 120 LWPLAIDLSITGSTVALLALTGQARGAQAYEVEHLDAHPLSPVA-PVHVSVHT------- 171 Query: 171 LVHVTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDE 230 A A LP++ AA RL+D Sbjct: 172 --------------SAQAVAQAAAVDVAEPATDLPVE---------------AAERLLDA 202 Query: 231 GVTRIDRAKVAQVLAEHAEGTAPSMIARKLQVGYSTVVRILDHHTAQEVNA 281 GVTRIDR KVAQVLAEHAEGTAPSMIARKL VGYSTVVRIL+HHTA A Sbjct: 203 GVTRIDRVKVAQVLAEHAEGTAPSMIARKLSVGYSTVVRILEHHTAHAAQA 253 >UniRef50_Q3L913 Hypothetical membrane protein n=2 Tax=Rhodococcus erythropolis RepID=Q3L913_RHOE4 Length = 455 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 12/204 (5%) Query: 86 AVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS---AERAE 142 + + AF LSFA R+LA + + ++ P ++D +I G+TIA++ +S ++R Sbjct: 47 GITTGAFVLSFAVQRDLA-RQALIPEHLTWIFPAIVDSAILGATIAIVIISKLNMSKRDR 105 Query: 143 VQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAE 202 + A V V + A+ A + + A A A Sbjct: 106 GFYIALAVSVVVISILGNA-YHAYHAAIAAREFISGGGDLGFSPLAPAIAAAIAIIPPAL 164 Query: 203 PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSM------- 255 L + A +V+ G D A LA + P Sbjct: 165 VLAFTHGITVLVKAVGMAYAAYREIVETGTATDDAMDTASDLAADRDPMQPDFRDSVTRK 224 Query: 256 IARKLQVGYSTVVRILDHHTAQEV 279 IA +L+ ++T + HT Sbjct: 225 IAEQLETEHTTDATVDASHTNHPA 248 >UniRef50_A1UPK2 Putative uncharacterized protein n=1 Tax=Mycobacterium sp. KMS RepID=A1UPK2_MYCSK Length = 350 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 7/187 (3%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKL 67 AT FF GWL S S+ GNV HALL + +AA A V P+ LL ATH L Sbjct: 12 HRRATAFFLGWLILAASMSLAGNVGHALLIAPVEMGWLAAGAALVPPIVLLAATHSATWL 71 Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 V++R G Y L +T A+A +FALSF ALR AVV G+ +++++ P VID++I Sbjct: 72 VRARSAGWVYWTCLALTAALAVGSFALSFDALRSFAVVL-GIRESLSWIWPAVIDVAIAH 130 Query: 128 STIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVH------VTAQPVHE 181 +T+ LL+++ R E ++ P + V+ EA G+V +A PV Sbjct: 131 ATLCLLSMARPARVESFSTSRAAAAVGAPELSVPVAVSAEASGVVRDGVDDAQSANPVSA 190 Query: 182 PVRGVTV 188 P G V Sbjct: 191 PGPGPAV 197 >UniRef50_C1BE54 Hypothetical membrane protein n=1 Tax=Rhodococcus opacus B4 RepID=C1BE54_RHOOB Length = 390 Score = 116 bits (290), Expect = 8e-25, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 6/191 (3%) Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 +Q R + A + ++ I + + + AF LSFA R+LA+ G+ + ++ P ++D +I G Sbjct: 11 IQVRALIAALIVAISIAIGITTGAFVLSFAVQRDLAL-QAGIPHYLTWIFPAIVDGAILG 69 Query: 128 STIALLAL---SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVR 184 +TIA++AL S + V V V + + A + + Sbjct: 70 ATIAVVALSKISGRATGKRFFLWLAVVVVFISVFGNAYHARRAGEEAARNVAAGM-DLGF 128 Query: 185 GVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLV-DEGVTRIDRAKVAQV 243 + A L T L D ++ + + Sbjct: 129 TPLTPTGASLIAIIPPLLVLAFTHGVGILIKAIGTAHTEYNALCNDIASRSVEERESSGA 188 Query: 244 LAEHAEGTAPS 254 ++ P Sbjct: 189 VSTRLNPQVPD 199 Score = 40.7 bits (93), Expect = 0.065, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 15/94 (15%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAA---------------LAAV 52 R + RFF S+ GN HA + + VAA +A + Sbjct: 83 RATGKRFFLWLAVVVVFISVFGNAYHARRAGEEAARNVAAGMDLGFTPLTPTGASLIAII 142 Query: 53 APLALLGATHGVHKLVQSRIIGGAYVASLWITVA 86 PL +L THGV L+++ +L +A Sbjct: 143 PPLLVLAFTHGVGILIKAIGTAHTEYNALCNDIA 176 >UniRef50_Q0RUX8 Possible mycobacteriophage excisionase n=3 Tax=Rhodococcus RepID=Q0RUX8_RHOSR Length = 448 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 8/199 (4%) Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 +Q R + A + ++ I V + + AF LSFA R+LA+ G+ + ++ P ++D +I G Sbjct: 11 IQLRALIAALIVAIAIAVGITTGAFVLSFAVQRDLAL-QAGIPHYLTWIFPAIVDGAILG 69 Query: 128 STIALLALS---SAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVR 184 +TIA++ALS + + V V V + + A + E Sbjct: 70 ATIAIVALSKINGSATGKHFFLWLAVVVVFISVFGNAYHAYRAGEAAARSVAAGI-ELGY 128 Query: 185 GVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVL 244 + A L T +V DR + + + Sbjct: 129 TPLTPTGASLIAVIPPLLVLAFTHGVGILIKAIGTAHTEYIAVVR---NTRDREQRDEDI 185 Query: 245 AEHAEGTAPSMIARKLQVG 263 ++ A SM A + G Sbjct: 186 TDYRTAVAESMPASERNSG 204 >UniRef50_Q06GE1 Putative transmembrane protein n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GE1_9NOCA Length = 379 Score = 95.0 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 9/171 (5%) Query: 86 AVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL---SSAERAE 142 + + AF LSF+ L++LA V G + A++ P ++D I G+TIA++ L S + + Sbjct: 29 GITTGAFILSFSVLKDLA-VQGMLPAEHAWIFPAIVDGGILGATIAVIVLSKISGSAKGR 87 Query: 143 VQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAE 202 + V V + A T + A Sbjct: 88 NFFLCLLIAVVFVSVAGNAYHAYRAAQDAA-QTIAGGAILGFNPLAPTVAPIIAVIPPLL 146 Query: 203 PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAP 253 L + + LV D + + GT P Sbjct: 147 VLAFTHGIGILIKAIGSAFTEYSELVKAA----DATSTSVAAPDDISGTDP 193 >UniRef50_B4F338 Putative bacteriophage excisionase n=2 Tax=Rhodococcus equi RepID=B4F338_COREQ Length = 382 Score = 90.3 bits (222), Expect = 6e-17, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 13/148 (8%) Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A+ A+L +T + ++F LSF AL +L + G +++L P++ID +I +TI++L L Sbjct: 85 AFWAALTLTSMICLASFILSFVALADL-LHMTGQPRELSYLFPVIIDGTILQATISILWL 143 Query: 136 SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIARE 195 + + + V A +A A H P L A Sbjct: 144 AGND-DRGKERRFFWTVLAVAAGVS---IAGNALHAWVS-----HAPDFDPL---LAAAI 191 Query: 196 AAQAVAEPLPLDVETSTDPALFSTHAVA 223 + L + Sbjct: 192 STIPPISLLAASHGLTILARTPKRAPAG 219 Score = 77.6 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 12 TRFFRGWLAAGTSASILGNVTHALLD-SDAGSPVVAAALAAVAPLALLGATHGVHKLVQS 70 RFF LA SI GN HA + + P++AAA++ + P++LL A+HG+ L ++ Sbjct: 153 RRFFWTVLAVAAGVSIAGNALHAWVSHAPDFDPLLAAAISTIPPISLLAASHGLTILART 212 >UniRef50_D0YT23 Gp35 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT23_9ACTO Length = 299 Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 81 LWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAER 140 L++T+ +A +F LSF+ L + ++ G P +A++ PL ID I +TIA++A S + Sbjct: 2 LFLTIVLAVGSFVLSFSGLYDFSLT-CGYHPWLAWIWPLTIDGVIVAATIAVVAFSRRQD 60 Query: 141 AEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAV 200 + + + +A+ V+ V + I + Sbjct: 61 TRLWYVWMVLILASIGSIAGNIATVIFGLHTYQVSNIYVLAVGKA------IPPIGLILM 114 Query: 201 AE---PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIA 257 L + AA ++ G+ ++ V +A T P + Sbjct: 115 THMSVMLADPHPKTPKIEALGAEVTAAIPPIETGMPVVEEVDVLG-MAPQETATTPVQVE 173 Query: 258 RKLQVGYSTVVRILDHHTAQEVN 280 ST + + V Sbjct: 174 PTPPEEPSTAAPVQEEPVEVPVE 196 >UniRef50_UPI0001BC2C5D hypothetical protein BlinB_03557 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2C5D Length = 283 Score = 72.6 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 11/185 (5%) Query: 74 GGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALL 133 G + + + T+ +A AF LSF AL +LA G+A + A++ PL++D I +TIA++ Sbjct: 8 GWSVITAACGTIGIALGAFWLSFTALADLA-RRSGIASSQAWVWPLLVDGLIVVATIAVV 66 Query: 134 ALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIA 193 AL A + + VA A V A P +V + Sbjct: 67 ALDG--------RAGAWYPWGLLIAGALVSVAANAMHA--VVAAEAAVPGLLASVIASVP 116 Query: 194 REAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAP 253 A + + ++ + + A D + Sbjct: 117 PLVLLASTHLTVVLIRSAHHHRSSAVDGLEKAERTDAVDPELATVPDRTDGDGDELPLTS 176 Query: 254 SMIAR 258 S +A Sbjct: 177 STVAD 181 Score = 40.3 bits (92), Expect = 0.074, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKL 67 + + G L AG S+ N HA++ ++A P ++A+ +A+V PL LL +TH L Sbjct: 71 RAGAWYPWGLLIAGALVSVAANAMHAVVAAEAAVPGLLASVIASVPPLVLLASTHLTVVL 130 Query: 68 VQS 70 ++S Sbjct: 131 IRS 133 >UniRef50_B2HFL8 Phage excisionase n=1 Tax=Mycobacterium marinum M RepID=B2HFL8_MYCMM Length = 201 Score = 69.5 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAG-SPVVAAALAAVAPLALLGATHGVHK 66 + + FF LA AS+ N HA++ +P + AA+ V P++LL HG Sbjct: 43 QRANRSFFWWVLALAAMASVGSNALHAIVAPGNELAPWLKAAIGVVPPVSLLATAHGAAI 102 Query: 67 LVQSR 71 L + R Sbjct: 103 LSRIR 107 Score = 46.0 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 5/144 (3%) Query: 103 AVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTETH 162 A V+ +A L P+++D +I +T+A+LAL + + + + V A Sbjct: 4 ATRLAAVSITVAPLWPVIVDGTILSATMAVLALGAYGAQQRANRSFFWWVLALAAMAS-- 61 Query: 163 LVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAV 222 V A + + ++ + A A + + Sbjct: 62 -VGSNALHAIVAPGNELAP--WLKAAIGVVPPVSLLATAHGAAILSRIRPMTVKAARVQQ 118 Query: 223 AAARLVDEGVTRIDRAKVAQVLAE 246 + R A+ + + Sbjct: 119 ETRQAQRAAERRRYWVSTARTIQQ 142 >UniRef50_Q5Z1Z3 Putative phage recombinase n=1 Tax=Nocardia farcinica RepID=Q5Z1Z3_NOCFA Length = 207 Score = 63.8 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 15/142 (10%) Query: 69 QSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGS 128 QS+ + A +++ + +A+ +AF LSFAALR+LA+ +A+L P+++D +I + Sbjct: 7 QSKGVRWARWSAVLVVLAIGGAAFVLSFAALRDLAI-KAHTPTHLAWLFPVIVDGTIIQA 65 Query: 129 TIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTV 188 TIA+LAL+ + A H V + Sbjct: 66 TIAVLALADSPERRWFTGVLAAGAAVSIGGNVAH--------------SLVSGHGYLAAL 111 Query: 189 ADLIAREAAQAVAEPLPLDVET 210 +IA A L + + T Sbjct: 112 LAVIAPAALLIDTHGLAVLLRT 133 >UniRef50_C5EA24 ABC-type branched-chain amino acid transport system protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=C5EA24_BIFLO Length = 373 Score = 61.1 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 46/143 (32%), Gaps = 9/143 (6%) Query: 81 LWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAER 140 + + V +A AF LSF ALR L V G+ P +++ PL +D +I T A Sbjct: 1 MTVGVMIAVIAFVLSFDALR-LVFVSSGINPLLSWGGPLCVDGTILLCTWATWGFRKG-- 57 Query: 141 AEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAV 200 H + A V V A + P G I A Sbjct: 58 ----HIRGRWYPWAGLVLFSLFSVTGNALHAWLNAGGML--PTWGAPAIMSIPPIALLYS 111 Query: 201 AEPLPLDVETSTDPALFSTHAVA 223 + + D +T A Sbjct: 112 THLIVIIAGDRQDKLARTTGKAA 134 Score = 48.0 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKLVQSRIIG 74 L + S+ GN HA L++ P A A+ ++ P+ALL +TH + + R Sbjct: 66 WAGLVLFSLFSVTGNALHAWLNAGGMLPTWGAPAIMSIPPIALLYSTHLIVIIAGDRQDK 125 Query: 75 GAYVA 79 A Sbjct: 126 LARTT 130 >UniRef50_B7GRA6 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GRA6_BIFLI Length = 220 Score = 60.7 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 12/189 (6%) Query: 78 VASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 + + V +A AF +SF ALR + + G+ A+A++ P++ID ST+A + Sbjct: 2 WPGVTVAVVLALLAFIISFDALRAVGLA-CGINAALAWMFPIIIDG----STLAFTWAAW 56 Query: 138 AERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAA 197 A + P + V + A V + P V + A Sbjct: 57 AFKTRRMGTLYPWLML---VLFSVISLIGNALHAHPVMVNGMLLPDWVPPVIMTVPPVAL 113 Query: 198 QAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIA 257 A + L + D + A + G + + +A + + P A Sbjct: 114 LATTHMIVLAAGRTFDRQAMAETAASD----PAGPSAAPTPEPTPGIAPEPDASTPDDPA 169 Query: 258 RKLQVGYST 266 ++ + T Sbjct: 170 PAIETDHDT 178 >UniRef50_A4TG29 Putative uncharacterized protein n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TG29_MYCGI Length = 349 Score = 60.7 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 9/162 (5%) Query: 72 IIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIA 131 + A + ++ IT VA+++F LSFA+L +LA G +A L P+++DL+I +T+A Sbjct: 45 AVRVACIVAVLITAVVAAASFVLSFASLADLA-QRSGYPAELAKLWPVIVDLTIVLATVA 103 Query: 132 LLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADL 191 ++ L A H V A + A + P Sbjct: 104 VIVLGPAGVGSRAHRRYFWAVLAISAIIS---IGGNALHGYLPPDTAL-WP-WLAACIAA 158 Query: 192 IAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVT 233 +A + A + S A S A AA VD Sbjct: 159 VAPLSLLATVHGAATMLRIS---AFVSRRAPAADASVDTPTA 197 Score = 52.2 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGS-PVVAAALAAVAPLALLGATHGVHKL 67 + R+F LA SI GN H L D P +AA +AAVAPL+LL HG + Sbjct: 115 RAHRRYFWAVLAISAIISIGGNALHGYLPPDTALWPWLAACIAAVAPLSLLATVHGAATM 174 Query: 68 VQSRI 72 ++ Sbjct: 175 LRISA 179 >UniRef50_D2Q9S7 Putative uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=D2Q9S7_9BIFI Length = 411 Score = 58.8 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 39/132 (29%), Gaps = 9/132 (6%) Query: 78 VASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 + + + AF LSF ALR L V G+ P +++ P+ +D +I T A Sbjct: 20 WPGITAGLVIGLIAFILSFDALR-LVFVSCGINPYLSWGGPVCVDGTILLCTWATWGFKK 78 Query: 138 AERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAA 197 + P V + A + + P I A Sbjct: 79 GHIRGGWY---PWAGL---VLFSGCSIGGNALHALIN--NGLELPAWAPATIMSIPPVAM 130 Query: 198 QAVAEPLPLDVE 209 + + Sbjct: 131 LYATHLIVIIAG 142 Score = 46.4 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKLVQSRI 72 L + SI GN HAL+++ P A + ++ P+A+L ATH + + R+ Sbjct: 88 WAGLVLFSGCSIGGNALHALINNGLELPAWAPATIMSIPPVAMLYATHLIVIIAGDRL 145 >UniRef50_Q70K80 Putative mycobacteriophage excisionase n=1 Tax=Gordonia westfalica RepID=Q70K80_9ACTO Length = 292 Score = 58.0 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 57/176 (32%), Gaps = 5/176 (2%) Query: 75 GAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLA 134 + ++ +++ V ++F LSF AL +L G + ++ L+P+VID+ I +T + Sbjct: 19 ASVATAVVLSLIVVGASFTLSFNALADLGRRSGAIPDSLTALLPVVIDVFILQATWCVYV 78 Query: 135 LSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAR 194 + + + T VA A ++A Sbjct: 79 ATRRRDDAGKRYHFSMLAI-----FSTVSVAGNAGHAYLAAGDQGVAHGLMAVAIAMVAP 133 Query: 195 EAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEG 250 A A L + V + S A + + A HA+ Sbjct: 134 LALLASIHGLVMHVWAGGGEPMPSRTDHAHEPGEVQLESSDRAHADPSAGASHAQP 189 Score = 41.8 bits (96), Expect = 0.030, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGS---PVVAAALAAVAPLALLGATHGV 64 ++ R+ LA ++ S+ GN HA L + ++A A+A VAPLALL + HG+ Sbjct: 85 DAGKRYHFSMLAIFSTVSVAGNAGHAYLAAGDQGVAHGLMAVAIAMVAPLALLASIHGL 143 >UniRef50_B8HHK6 Putative uncharacterized protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HHK6_ARTCA Length = 206 Score = 54.9 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 6/126 (4%) Query: 84 TVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEV 143 TV +A AF LSFA+L +LA G+ ++++ P+++D I +T+A++AL+ +R + Sbjct: 23 TVLIAVGAFVLSFASLTDLAAR-SGIDRNLSWIWPIIVDGLIVAATVAIVALAGHDRKTL 81 Query: 144 QHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAEP 203 A P + T A A V V P V + A+ Sbjct: 82 ---AYPWALLFLGAVVSTAANAVHAIVSVDQAHGGV--PPVISAVMAAMPPVVLLAITHL 136 Query: 204 LPLDVE 209 L V+ Sbjct: 137 TVLLVQ 142 >UniRef50_B8HIX1 Putative Trp operon repressor n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HIX1_ARTCA Length = 250 Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 11/164 (6%) Query: 80 SLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAE 139 SL + +A ++F LSF L + A W G+ + +LVP+V+D +I +A +S + Sbjct: 16 SLALVGVLALASFTLSFLGLIQ-AAAWAGIPEYLRWLVPIVVDSTILVYAVA----ASVQ 70 Query: 140 RAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQA 199 RA + A V + G +A A Sbjct: 71 RARGESTTLSWMAVAFFTLVSVLANGAHVLAPSGVARDLDSTVIFGAFLA------AIMP 124 Query: 200 VAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQV 243 V+ + + A + + + DR + Sbjct: 125 VSLFFATETTVNLVVAPAYGSVAQRRKRARDQLVHADRMDHGKD 168 >UniRef50_C7NLQ5 Putative uncharacterized protein n=2 Tax=Micrococcineae RepID=C7NLQ5_KYTSD Length = 311 Score = 50.7 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 78 VASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 V ++ TV +A+ AF LSF AL +LA GV + A+ PL++D I +T+A++A++ Sbjct: 2 VTAVAGTVFIAAGAFWLSFTALADLAAR-SGVGGSQAWAWPLIVDGIIVVATVAVVAMAG 60 Query: 138 AERAEVQHDAQPVHVAAQPVHTETHLVAHEAD 169 R+ A + AA V AD Sbjct: 61 Q-RSAWYPWALLIGGAAVSVTANALHAVVAAD 91 >UniRef50_Q0RMB7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RMB7_FRAAA Length = 327 Score = 49.5 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 77/253 (30%), Gaps = 9/253 (3%) Query: 13 RFFRGWLAAGTSASILGNVTHALLDSDAG-SPVVAAALAAVAPLALLGATHGVHKLVQSR 71 R L S+ N HAL+ A S + L+A P+A+LG+ H Sbjct: 12 RLPLTMLIFSLGMSVFANGEHALIYHRAQLSAWASVLLSATPPVAVLGSLHMQLSPFGQP 71 Query: 72 IIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIA 131 G +T AV + +FALSF L ++ ++ G+ A++ P +DL + + Sbjct: 72 GSSGQRYGDWALTGAVFALSFALSFETLWQIGLII-GLDHHFAWMFPAGLDLVAVRAAVL 130 Query: 132 ---LLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTV 188 + S+ + A+ V P E A Sbjct: 131 ADRIARRSAPLLTDPAAAAEAVAGETSPTEVEVFGSPARRWQPWRSRAAGSVAVRPAPAH 190 Query: 189 A---DLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLA 245 AA A P L AAR+ E D + Sbjct: 191 PLLDAASPGHAAVAPENGSPTSQPDEPRQQLHVGVQPDAARVHSEPPPAEDGKGQPDDVP 250 Query: 246 EHAEGTAPSMIAR 258 + P+ A Sbjct: 251 A-QDPEVPTWPAD 262 >UniRef50_Q2FSQ8 Putative transcriptional regulator, AsnC family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FSQ8_METHJ Length = 232 Score = 48.4 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 79 ASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLA--LS 136 A VA AF LS+ LRELA G++ +++ L P+ +D + S+IA+L LS Sbjct: 12 AVALFCAIVAGCAFLLSYTNLRELA-EKAGISSSLSPLWPICLDSLLVVSSIAILYNNLS 70 Query: 137 SAERAEVQHDAQPVH 151 + Sbjct: 71 RKGSLRLWAIFIAFS 85 >UniRef50_D0LFE9 Putative uncharacterized protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LFE9_GORB4 Length = 300 Score = 47.6 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 7/125 (5%) Query: 80 SLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAE 139 + +++ VA +AFALSF+AL +LA + G + L P+VID+ + ++ +L+ + Sbjct: 24 AAGLSLIVAGAAFALSFSALADLARMTGVFPEPLPGLFPIVIDVFMIQASYSLVVAA--A 81 Query: 140 RAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQA 199 + V A L + A P I A A Sbjct: 82 ADDRGSRNYHWSVLAVTSTVSVALNCYHALAA-----SGDVLPSAVSAAIASIPPLALLA 136 Query: 200 VAEPL 204 L Sbjct: 137 STHGL 141 Score = 42.6 bits (98), Expect = 0.015, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKL 67 + + LA ++ S+ N HAL S P V+AA+A++ PLALL +THG+ Sbjct: 85 RGSRNYHWSVLAVTSTVSVALNCYHALAASGDVLPSAVSAAIASIPPLALLASTHGLIVH 144 Query: 68 VQSR 71 + +R Sbjct: 145 LSAR 148 >UniRef50_D1SIS3 Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SIS3_9ACTO Length = 337 Score = 43.0 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 82/244 (33%), Gaps = 9/244 (3%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKLVQSRIIGG 75 R L G +ASI NV HA +++ +AA PLALL + ++ R Sbjct: 34 RAVLTLGVAASIAANVLHA------RPNLISQLIAAWPPLALLLTVELISRVPSHR--RS 85 Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 L T A+A A +S+ + +A +G + ++L+P+ +D + ++I+L+ + Sbjct: 86 LAALRLLATAAIAGIAGWVSYWHMVGVAARYGEIDAGASYLLPISVDGLVVVASISLVEI 145 Query: 136 SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIA-R 194 + RA AA H + AD + E V A Sbjct: 146 TGRIRAGTGRPTPTQQPAAPQERLGHHALRAGADRTTRRRMPRLAETVTETKPMATSASP 205 Query: 195 EAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPS 254 A T D A + + A H T + Sbjct: 206 GAVSTPVPSRGKAASTQGDGAPDRPAQPDRDDVRGDSEPSRPAGDRAGGTPTHDAKTPAT 265 Query: 255 MIAR 258 + + Sbjct: 266 IPSD 269 >UniRef50_D1S9S3 Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S9S3_9ACTO Length = 396 Score = 42.6 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKLVQSRIIGG 75 R LA G +ASI NV HA +++ +AA PLALL + ++ R G Sbjct: 33 RAVLALGVAASIAANVLHA------RPNLISQVIAAWPPLALLLTVELISRVPAYR--RG 84 Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A L +A A +S+ + +A +G A ++L+P+ +D + ++I+L+ + Sbjct: 85 LAAARLIAAAVIAGIAAWVSYWHMVGVAARYGETDAAASYLLPISVDGLVVVASISLVEI 144 Query: 136 SSA 138 + Sbjct: 145 AGR 147 >UniRef50_B0P7M9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7M9_9FIRM Length = 190 Score = 41.0 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 9/107 (8%) Query: 32 THALLDSDAGSPVVAAALAAVAPLALLGATHGVHKLVQSRIIGGAYVASLWITVAVASSA 91 + +D + ++A A + P+A+ AT H++ + +L T+ V + Sbjct: 39 GNQWIDDETMLNMLAIAESTPGPVAINSATFIGHRV-------AGFWGALCATLGVTLPS 91 Query: 92 FALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSA 138 F + ++ L ++ +A++ + + A+L L Sbjct: 92 FLV--ISILSLFIMQYKKIKWLAWIFDGIRAGVVVLIVNAVLKLGKQ 136 >UniRef50_A7TUS9 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=A7TUS9_STRLI Length = 355 Score = 41.0 bits (94), Expect = 0.046, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 63/189 (33%), Gaps = 11/189 (5%) Query: 84 TVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL-SSAERAE 142 VA+ + ALS+ AL+++AV + + + PLVID I ALL L ++ RA Sbjct: 20 VVALGGAGCALSYDALQQMAVAI-HIRGFLTYSFPLVIDGFIAYGIRALLVLRNAPLRAR 78 Query: 143 VQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAE 202 + A + V T + + V V V IA A Sbjct: 79 LYVWTLFGTATAASIWANALHAVRINQDTVTGTGLRLGDAV--VAVLSTIAPLALAGAVH 136 Query: 203 PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARKLQV 262 L + + + L DR A+V G P A +++ Sbjct: 137 -LYILIARGPVKDTDRQNLGQPGHLGQT-----DRGDAAEVTRTDRAG-QPRSAAGQVKS 189 Query: 263 GYSTVVRIL 271 G S Sbjct: 190 GQSVTALTD 198 >UniRef50_C9YVA9 Putative membrane protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YVA9_STRSW Length = 284 Score = 40.7 bits (93), Expect = 0.057, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 7/152 (4%) Query: 76 AYVASLWITVAV-ASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLA 134 A A++ + VA+ + AFALS+ ALR++AV + + + PLVID I ALL Sbjct: 3 ALTAAIRLGVALVGTIAFALSYDALRQMAVAI-HIRGVLTYAFPLVIDGFIAIGVAALLI 61 Query: 135 L-SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIA 193 L ++ R+ + + T A A L A Sbjct: 62 LRTAPWRSRLY----VWALVGLATVTSIWANALHAIRLNQQARTAGLHLDDITVGALSAI 117 Query: 194 REAAQAVAEPLPLDVETSTDPALFSTHAVAAA 225 A A A L L + P A + Sbjct: 118 APLALAGAVHLDLVIRRHPTPRAQEAAATTSQ 149 >UniRef50_C5C9M1 Putative uncharacterized protein n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9M1_MICLC Length = 383 Score = 40.7 bits (93), Expect = 0.057, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 56/167 (33%), Gaps = 8/167 (4%) Query: 74 GGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALL 133 G A + T AF++SFAAL E+A W G+ P + + VP+ IDL+I ++L Sbjct: 73 GRFIRAVVAGTAVAGLVAFSISFAALYEVAA-WLGLPPFMHWAVPVFIDLAILVYAGSVL 131 Query: 134 ALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIA 193 + + + V + V G +A ++ Sbjct: 132 V----HESRGESARASWWALGA---FTGLSMIANGAHAWSAENASVWQSVVGALIAVMVP 184 Query: 194 REAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKV 240 A + + VE V+ + +DR + Sbjct: 185 VAVFVATNQLARVAVENPDSRRAERASQVSEEAEQLKAQAELDRRRA 231 >UniRef50_O64228 Gene 34.1 protein n=5 Tax=Siphoviridae RepID=VG341_BPMD2 Length = 145 Score = 40.7 bits (93), Expect = 0.059, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 47/134 (35%), Gaps = 21/134 (15%) Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A + TVAV AF+LSF AL EL+ G A +++VPLVID I +T+A +AL Sbjct: 10 ALKVATAGTVAVGGLAFSLSFTALSELSAANGV---AQSWMVPLVIDGGILVATMATVAL 66 Query: 136 SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIARE 195 S + A + + VA V I Sbjct: 67 SR----------HGWYAWALLILSSLMSVAGNVAHA--------QPHGLIAMVIAAIPPL 108 Query: 196 AAQAVAEPLPLDVE 209 A L Sbjct: 109 WLLASTHLTVLLYR 122 >UniRef50_Q6AIX7 Related to transport protein TolQ n=1 Tax=Desulfotalea psychrophila RepID=Q6AIX7_DESPS Length = 463 Score = 40.3 bits (92), Expect = 0.078, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 49/164 (29%), Gaps = 17/164 (10%) Query: 11 ATRFFRGWLAAGTSASILGNVTHALLDSDAGSP--------VVAAALAAVAPLALLGATH 62 A FF G+L+ G +A L N TH L S + A + L T Sbjct: 195 AGGFFLGYLSEGDAAFALANGTHPPLSIPGNSRLLNRELKAWLTGGSAVLP----LDITA 250 Query: 63 GVHKLVQSRIIGGAYV-----ASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLV 117 G Q + G L+ + F L+ +L + A L Sbjct: 251 GAALRAQEQEQGWRQWLEAGGVLLYPILISGLVGFLLTVLKAGQLFAQRPLDKKSKAELF 310 Query: 118 PLVIDLSITGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTET 161 + D I G+ LL +S A V + H Sbjct: 311 ARIRDGQIAGAENILLKISRCPAARVLAGSLLFHDRGLDTLDNV 354 >UniRef50_Q6XMV8 Putative uncharacterized protein n=1 Tax=Rhodococcus erythropolis RepID=Q6XMV8_RHOER Length = 356 Score = 40.3 bits (92), Expect = 0.084, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 58/193 (30%), Gaps = 9/193 (4%) Query: 94 LSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAER---AEVQHDAQPV 150 LSF ALR LA+ V P A++ P+ ID++ +T + A R A V Sbjct: 43 LSFDALRALAI-EINVHPGRAWMAPVAIDVAQAAATAGYVIFRVANRYTWARRYCMTLAV 101 Query: 151 HVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVET 210 A V ++ A + A + A AA L L Sbjct: 102 VTVALSVVGNSYHSYQLAARNLARVAAG-DILDFIPQPPAIAAVIAAIFPLLWLALFHLF 160 Query: 211 STDPALFSTHAVAAARLVDE-GVTRIDRAKVAQVLAEHAEGTAPSMIARKLQVGYSTVVR 269 + + V + + A L E T P + S V Sbjct: 161 TMMLQVVIDKRAQHRGAATTHHVAQRENNIAAPTLTFTEEATEPESTLVAIATPESAVST 220 Query: 270 I---LDHHTAQEV 279 + HHT + Sbjct: 221 VRATDAHHTTRGA 233 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0RMB7 Putative uncharacterized protein n=1 Tax=Frankia... 151 2e-35 UniRef50_D0YT23 Gp35 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT... 146 8e-34 UniRef50_UPI0001AF6E76 phage excisionase n=1 Tax=Mycobacterium k... 140 7e-32 UniRef50_Q9ZWZ8 Gp82 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZWZ... 136 7e-31 UniRef50_Q3L913 Hypothetical membrane protein n=2 Tax=Rhodococcu... 135 1e-30 UniRef50_C1BE54 Hypothetical membrane protein n=1 Tax=Rhodococcu... 130 7e-29 UniRef50_A1UPK2 Putative uncharacterized protein n=1 Tax=Mycobac... 122 1e-26 UniRef50_C5EA24 ABC-type branched-chain amino acid transport sys... 121 3e-26 UniRef50_Q70K80 Putative mycobacteriophage excisionase n=1 Tax=G... 121 4e-26 UniRef50_B7GRA6 Putative uncharacterized protein n=1 Tax=Bifidob... 116 1e-24 UniRef50_Q0RUX8 Possible mycobacteriophage excisionase n=3 Tax=R... 114 4e-24 UniRef50_D2Q9S7 Putative uncharacterized protein n=2 Tax=Bifidob... 114 5e-24 UniRef50_B4F338 Putative bacteriophage excisionase n=2 Tax=Rhodo... 108 3e-22 UniRef50_UPI0001BC2C5D hypothetical protein BlinB_03557 n=1 Tax=... 103 7e-21 UniRef50_Q06GE1 Putative transmembrane protein n=1 Tax=Rhodococc... 95 2e-18 UniRef50_B8HIX1 Putative Trp operon repressor n=1 Tax=Arthrobact... 91 5e-17 UniRef50_A4TG29 Putative uncharacterized protein n=1 Tax=Mycobac... 89 2e-16 UniRef50_D0LFE9 Putative uncharacterized protein n=1 Tax=Gordoni... 86 9e-16 UniRef50_B2HFL8 Phage excisionase n=1 Tax=Mycobacterium marinum ... 83 1e-14 UniRef50_Q2FSQ8 Putative transcriptional regulator, AsnC family ... 73 1e-11 UniRef50_Q5Z1Z3 Putative phage recombinase n=1 Tax=Nocardia farc... 72 2e-11 UniRef50_B8HHK6 Putative uncharacterized protein n=1 Tax=Arthrob... 71 5e-11 UniRef50_C7NLQ5 Putative uncharacterized protein n=2 Tax=Microco... 63 8e-09 Sequences not found previously or not previously below threshold: UniRef50_C5C9M1 Putative uncharacterized protein n=1 Tax=Microco... 61 4e-08 UniRef50_UPI0001BC2B98 hypothetical protein BlinB_20437 n=1 Tax=... 60 7e-08 UniRef50_O64228 Gene 34.1 protein n=5 Tax=Siphoviridae RepID=VG3... 59 1e-07 UniRef50_Q1EQR2 Putative uncharacterized protein n=1 Tax=Strepto... 55 3e-06 UniRef50_C9YVA9 Putative membrane protein n=1 Tax=Streptomyces s... 54 6e-06 UniRef50_UPI0001B4C985 hypothetical protein SlivT_16287 n=1 Tax=... 54 7e-06 UniRef50_A7TUS9 Putative uncharacterized protein n=4 Tax=Strepto... 51 3e-05 UniRef50_D1XKZ8 Putative uncharacterized protein n=2 Tax=Strepto... 50 7e-05 UniRef50_UPI0001AECAEC hypothetical protein SalbJ_16722 n=1 Tax=... 49 2e-04 UniRef50_C9ZFD0 Putative membrane protein n=1 Tax=Streptomyces s... 49 2e-04 UniRef50_B4V8X2 Putative uncharacterized protein n=1 Tax=Strepto... 48 3e-04 UniRef50_UPI0001B54ED7 hypothetical protein SSPB78_17679 n=1 Tax... 48 5e-04 UniRef50_D1SIS3 Putative uncharacterized protein n=1 Tax=Micromo... 47 7e-04 UniRef50_D1WVV6 Putative uncharacterized protein n=2 Tax=Strepto... 47 7e-04 UniRef50_UPI0001AF1564 hypothetical protein SrosN15_18272 n=1 Ta... 46 0.001 UniRef50_Q2LEQ5 Putative uncharacterized protein n=3 Tax=Strepto... 44 0.007 UniRef50_D1A5E1 Putative uncharacterized protein n=1 Tax=Thermom... 44 0.008 UniRef50_Q6XMV8 Putative uncharacterized protein n=1 Tax=Rhodoco... 43 0.008 UniRef50_A8SEN9 Putative uncharacterized protein n=1 Tax=Faecali... 43 0.014 UniRef50_UPI00016C5093 hypothetical protein GobsU_26411 n=1 Tax=... 43 0.017 UniRef50_D1S9S3 Putative uncharacterized protein n=1 Tax=Micromo... 43 0.018 UniRef50_C7Q5J6 Putative uncharacterized protein n=1 Tax=Catenul... 42 0.028 UniRef50_C9Z8K5 Putative SpdA-like protein n=1 Tax=Streptomyces ... 41 0.045 UniRef50_B1W4S8 Putative uncharacterized protein n=3 Tax=Strepto... 41 0.045 UniRef50_B5H3A0 Transmembrane protein n=9 Tax=Bacteria RepID=B5H... 41 0.051 UniRef50_B5HVL8 Putative uncharacterized protein n=1 Tax=Strepto... 41 0.053 UniRef50_Q2J7P8 Putative uncharacterized protein n=1 Tax=Frankia... 40 0.067 >UniRef50_Q0RMB7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RMB7_FRAAA Length = 327 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 77/258 (29%), Gaps = 9/258 (3%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAGS-PVVAAALAAVAPLALLGATHGVHK 66 R R L S+ N HAL+ A + L+A P+A+LG+ H Sbjct: 7 RSRPLRLPLTMLIFSLGMSVFANGEHALIYHRAQLSAWASVLLSATPPVAVLGSLHMQLS 66 Query: 67 LVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSIT 126 G +T AV + +FALSF L ++ ++ G+ A++ P +DL Sbjct: 67 PFGQPGSSGQRYGDWALTGAVFALSFALSFETLWQIGLII-GLDHHFAWMFPAGLDLVAV 125 Query: 127 GSTIA---LLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPV 183 + + + S+ + A+ V P E A Sbjct: 126 RAAVLADRIARRSAPLLTDPAAAAEAVAGETSPTEVEVFGSPARRWQPWRSRAAGSVAVR 185 Query: 184 RGVTVA---DLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKV 240 AA A P L AAR+ E D Sbjct: 186 PAPAHPLLDAASPGHAAVAPENGSPTSQPDEPRQQLHVGVQPDAARVHSEPPPAEDGKGQ 245 Query: 241 AQVLAEHAEGTAPSMIAR 258 + + P+ A Sbjct: 246 PDDVPA-QDPEVPTWPAD 262 >UniRef50_D0YT23 Gp35 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT23_9ACTO Length = 299 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 81 LWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAER 140 L++T+ +A +F LSF+ L + ++ G P +A++ PL ID I +TIA++A S + Sbjct: 2 LFLTIVLAVGSFVLSFSGLYDFSL-TCGYHPWLAWIWPLTIDGVIVAATIAVVAFSRRQD 60 Query: 141 AEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAV 200 + + + +A+ V+ V + I + Sbjct: 61 TRLWYVWMVLILASIGSIAGNIATVIFGLHTYQVSNIYVLAVGK------AIPPIGLILM 114 Query: 201 AE---PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIA 257 L + AA ++ G+ ++ V +A T P + Sbjct: 115 THMSVMLADPHPKTPKIEALGAEVTAAIPPIETGMPVVEEVDVLG-MAPQETATTPVQVE 173 Query: 258 RKLQVGYSTVVRILDHHTAQEVN 280 ST + + V Sbjct: 174 PTPPEEPSTAAPVQEEPVEVPVE 196 >UniRef50_UPI0001AF6E76 phage excisionase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6E76 Length = 297 Score = 140 bits (351), Expect = 7e-32, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 7/191 (3%) Query: 70 SRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGST 129 R++ + AS+W+TV +A+ +F LSF +LR LA + ++L PL++D I +T Sbjct: 64 LRLVIRSRTASVWLTVFIATISFVLSFNSLRSLAAMTA-WPGWPSWLSPLLVDGVIILAT 122 Query: 130 IALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVA 189 + +++L+ RA+ + V V T V G Sbjct: 123 LVIVSLA-PYRAQFWNRVFLWTVLGVGALVS---VGGNGLHAWLSTGHLVSWMRWGSAGL 178 Query: 190 DLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAE 249 + A A L + P + V R ++ R+DR + A H E Sbjct: 179 ACVPPVALLATTHILGILWRFDPVPPPDARSQV-RDRALELAAQRMDRWEAAAA-KLHEE 236 Query: 250 GTAPSMIARKL 260 G PS+ K+ Sbjct: 237 GYCPSVPTDKM 247 Score = 66.8 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 11 ATRFFRGWLAAGTSASILGNVTHALLDSD---AGSPVVAAALAAVAPLALLGATHGVHKL 67 F L G S+ GN HA L + + +A LA V P+ALL TH + L Sbjct: 137 NRVFLWTVLGVGALVSVGGNGLHAWLSTGHLVSWMRWGSAGLACVPPVALLATTHILGIL 196 Query: 68 VQ 69 + Sbjct: 197 WR 198 >UniRef50_Q9ZWZ8 Gp82 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZWZ8_BPMT4 Length = 259 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 140/286 (48%), Positives = 164/286 (57%), Gaps = 38/286 (13%) Query: 1 MSTHKT-----PRESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPL 55 MS H T P+E+ATRFF WL A T+ASILGNVTHA+L + + +AAA A V P+ Sbjct: 1 MSNHTTTSESSPQEAATRFFWAWLIAATAASILGNVTHAVLGAASSPL-IAAAAAIVPPV 59 Query: 56 ALLGATHGVHKLVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAF 115 LLGATHGVH LV+SRI+G AY A+L I VA+A AF LSF ALRELA+V G+ P+IA+ Sbjct: 60 VLLGATHGVHALVRSRIVGAAYRAALTIVVALAVCAFVLSFEALRELAIVHAGMRPSIAW 119 Query: 116 LVPLVIDLSITGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVT 175 L PL IDLSITGST+ALLAL+ R + Sbjct: 120 LWPLAIDLSITGSTVALLALTGQARGAQAY------------------------------ 149 Query: 176 AQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRI 235 V + A+ + AA RL+D GVTRI Sbjct: 150 --EVEHLDAHPLSPVAPVHVSVHTSAQAVAQAAAVDVAEPATDLPVEAAERLLDAGVTRI 207 Query: 236 DRAKVAQVLAEHAEGTAPSMIARKLQVGYSTVVRILDHHTAQEVNA 281 DR KVAQVLAEHAEGTAPSMIARKL VGYSTVVRIL+HHTA A Sbjct: 208 DRVKVAQVLAEHAEGTAPSMIARKLSVGYSTVVRILEHHTAHAAQA 253 >UniRef50_Q3L913 Hypothetical membrane protein n=2 Tax=Rhodococcus erythropolis RepID=Q3L913_RHOE4 Length = 455 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 12/204 (5%) Query: 86 AVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS---AERAE 142 + + AF LSFA R+LA + + ++ P ++D +I G+TIA++ +S ++R Sbjct: 47 GITTGAFVLSFAVQRDLA-RQALIPEHLTWIFPAIVDSAILGATIAIVIISKLNMSKRDR 105 Query: 143 VQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAE 202 + A V V + + H A + + A A A Sbjct: 106 GFYIALAVSVVVISILGNAYHAYHAAI-AAREFISGGGDLGFSPLAPAIAAAIAIIPPAL 164 Query: 203 PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSM------- 255 L + A +V+ G D A LA + P Sbjct: 165 VLAFTHGITVLVKAVGMAYAAYREIVETGTATDDAMDTASDLAADRDPMQPDFRDSVTRK 224 Query: 256 IARKLQVGYSTVVRILDHHTAQEV 279 IA +L+ ++T + HT Sbjct: 225 IAEQLETEHTTDATVDASHTNHPA 248 >UniRef50_C1BE54 Hypothetical membrane protein n=1 Tax=Rhodococcus opacus B4 RepID=C1BE54_RHOOB Length = 390 Score = 130 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 6/191 (3%) Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 +Q R + A + ++ I + + + AF LSFA R+LA+ G+ + ++ P ++D +I G Sbjct: 11 IQVRALIAALIVAISIAIGITTGAFVLSFAVQRDLAL-QAGIPHYLTWIFPAIVDGAILG 69 Query: 128 STIALLAL---SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVR 184 +TIA++AL S + V V V + + A + + Sbjct: 70 ATIAVVALSKISGRATGKRFFLWLAVVVVFISVFGNAYHARRAGEEAARNVAAGM-DLGF 128 Query: 185 GVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLV-DEGVTRIDRAKVAQV 243 + A L T L D ++ + + Sbjct: 129 TPLTPTGASLIAIIPPLLVLAFTHGVGILIKAIGTAHTEYNALCNDIASRSVEERESSGA 188 Query: 244 LAEHAEGTAPS 254 ++ P Sbjct: 189 VSTRLNPQVPD 199 >UniRef50_A1UPK2 Putative uncharacterized protein n=1 Tax=Mycobacterium sp. KMS RepID=A1UPK2_MYCSK Length = 350 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 7/187 (3%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKL 67 AT FF GWL S S+ GNV HALL + +AA A V P+ LL ATH L Sbjct: 12 HRRATAFFLGWLILAASMSLAGNVGHALLIAPVEMGWLAAGAALVPPIVLLAATHSATWL 71 Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 V++R G Y L +T A+A +FALSF ALR AVV G+ +++++ P VID++I Sbjct: 72 VRARSAGWVYWTCLALTAALAVGSFALSFDALRSFAVVL-GIRESLSWIWPAVIDVAIAH 130 Query: 128 STIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVH------VTAQPVHE 181 +T+ LL+++ R E ++ P + V+ EA G+V +A PV Sbjct: 131 ATLCLLSMARPARVESFSTSRAAAAVGAPELSVPVAVSAEASGVVRDGVDDAQSANPVSA 190 Query: 182 PVRGVTV 188 P G V Sbjct: 191 PGPGPAV 197 >UniRef50_C5EA24 ABC-type branched-chain amino acid transport system protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=C5EA24_BIFLO Length = 373 Score = 121 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 54/205 (26%), Gaps = 13/205 (6%) Query: 81 LWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAER 140 + + V +A AF LSF ALR L V G+ P +++ PL +D +I T A Sbjct: 1 MTVGVMIAVIAFVLSFDALR-LVFVSSGINPLLSWGGPLCVDGTILLCTWATWGF----- 54 Query: 141 AEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAV 200 H + A V V A P G I A Sbjct: 55 -RKGHIRGRWYPWAGLVLFSLFSVTGNALHAWLN--AGGMLPTWGAPAIMSIPPIALLYS 111 Query: 201 AEPLPLDVETSTDPALFSTHAVA----AARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMI 256 + + D +T A + + A T + Sbjct: 112 THLIVIIAGDRQDKLARTTGKAAGPDDGHAGPAAATPETAGTEPVRTENPRAIPTPTAGP 171 Query: 257 ARKLQVGYSTVVRILDHHTAQEVNA 281 + + + A Sbjct: 172 EPGKATEPAPADPLDRYLFDPPAQA 196 Score = 72.6 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHK 66 + L + S+ GN HA L++ P A A+ ++ P+ALL +TH + Sbjct: 58 HIRGRWYPWAGLVLFSLFSVTGNALHAWLNAGGMLPTWGAPAIMSIPPIALLYSTHLIVI 117 Query: 67 LVQSRIIGGAYVAS 80 + R A Sbjct: 118 IAGDRQDKLARTTG 131 >UniRef50_Q70K80 Putative mycobacteriophage excisionase n=1 Tax=Gordonia westfalica RepID=Q70K80_9ACTO Length = 292 Score = 121 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 5/184 (2%) Query: 70 SRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGST 129 S + ++ +++ V ++F LSF AL +L G + ++ L+P+VID+ I +T Sbjct: 14 SATSTASVATAVVLSLIVVGASFTLSFNALADLGRRSGAIPDSLTALLPVVIDVFILQAT 73 Query: 130 IALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVA 189 + + + + T VA A Sbjct: 74 WCVYVATRRRDDAGKRYHFSMLAI-----FSTVSVAGNAGHAYLAAGDQGVAHGLMAVAI 128 Query: 190 DLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAE 249 ++A A A L + V + S A + + A HA+ Sbjct: 129 AMVAPLALLASIHGLVMHVWAGGGEPMPSRTDHAHEPGEVQLESSDRAHADPSAGASHAQ 188 Query: 250 GTAP 253 Sbjct: 189 PQVS 192 Score = 42.9 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 10 SATRFFRGWLAAGTSASILGNVTHALLDSDAGS---PVVAAALAAVAPLALLGATHGVH 65 + R+ LA ++ S+ GN HA L + ++A A+A VAPLALL + HG+ Sbjct: 86 AGKRYHFSMLAIFSTVSVAGNAGHAYLAAGDQGVAHGLMAVAIAMVAPLALLASIHGLV 144 >UniRef50_B7GRA6 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GRA6_BIFLI Length = 220 Score = 116 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 12/189 (6%) Query: 78 VASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 + + V +A AF +SF ALR + + G+ A+A++ P++ID ST+A + Sbjct: 2 WPGVTVAVVLALLAFIISFDALRAVGLA-CGINAALAWMFPIIIDG----STLAFTWAAW 56 Query: 138 AERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAA 197 A + P + V + A V + P V + A Sbjct: 57 AFKTRRMGTLYPWLML---VLFSVISLIGNALHAHPVMVNGMLLPDWVPPVIMTVPPVAL 113 Query: 198 QAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIA 257 A + L + D + A + G + + +A + + P A Sbjct: 114 LATTHMIVLAAGRTFDRQAMAETAASD----PAGPSAAPTPEPTPGIAPEPDASTPDDPA 169 Query: 258 RKLQVGYST 266 ++ + T Sbjct: 170 PAIETDHDT 178 Score = 42.9 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 3/78 (3%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHA---LLDSDAGSPVVAAALAAVAPLALLGATHGV 64 R T + L + S++GN HA +++ V + V P+ALL TH + Sbjct: 61 RRMGTLYPWLMLVLFSVISLIGNALHAHPVMVNGMLLPDWVPPVIMTVPPVALLATTHMI 120 Query: 65 HKLVQSRIIGGAYVASLW 82 A + Sbjct: 121 VLAAGRTFDRQAMAETAA 138 >UniRef50_Q0RUX8 Possible mycobacteriophage excisionase n=3 Tax=Rhodococcus RepID=Q0RUX8_RHOSR Length = 448 Score = 114 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 8/199 (4%) Query: 68 VQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITG 127 +Q R + A + ++ I V + + AF LSFA R+LA+ G+ + ++ P ++D +I G Sbjct: 11 IQLRALIAALIVAIAIAVGITTGAFVLSFAVQRDLAL-QAGIPHYLTWIFPAIVDGAILG 69 Query: 128 STIALLALS---SAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVR 184 +TIA++ALS + + V V V + + A + E Sbjct: 70 ATIAIVALSKINGSATGKHFFLWLAVVVVFISVFGNAYHAYRAGEAAARSVAAGI-ELGY 128 Query: 185 GVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVL 244 + A L T +V DR + + + Sbjct: 129 TPLTPTGASLIAVIPPLLVLAFTHGVGILIKAIGTAHTEYIAVVR---NTRDREQRDEDI 185 Query: 245 AEHAEGTAPSMIARKLQVG 263 ++ A SM A + G Sbjct: 186 TDYRTAVAESMPASERNSG 204 >UniRef50_D2Q9S7 Putative uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=D2Q9S7_9BIFI Length = 411 Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 45/168 (26%), Gaps = 11/168 (6%) Query: 78 VASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 + + + AF LSF ALR L V G+ P +++ P+ +D +I T A Sbjct: 20 WPGITAGLVIGLIAFILSFDALR-LVFVSCGINPYLSWGGPVCVDGTILLCTWATWGFKK 78 Query: 138 AERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAA 197 H + A V + A + + P I A Sbjct: 79 G------HIRGGWYPWAGLVLFSGCSIGGNALHALIN--NGLELPAWAPATIMSIPPVAM 130 Query: 198 QAVAEPLPLDVETSTDP--ALFSTHAVAAARLVDEGVTRIDRAKVAQV 243 + + D AL A+ Sbjct: 131 LYATHLIVIIAGDRLDKVNALIGRTLDDTETKTPTEPMTASTAEPLTT 178 Score = 68.8 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 14 FFRGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKLVQSRI 72 + L + SI GN HAL+++ P A + ++ P+A+L ATH + + R+ Sbjct: 86 YPWAGLVLFSGCSIGGNALHALINNGLELPAWAPATIMSIPPVAMLYATHLIVIIAGDRL 145 Query: 73 IG 74 Sbjct: 146 DK 147 >UniRef50_B4F338 Putative bacteriophage excisionase n=2 Tax=Rhodococcus equi RepID=B4F338_COREQ Length = 382 Score = 108 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 7/175 (4%) Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A+ A+L +T + ++F LSF AL +L + G +++L P++ID +I +TI++L L Sbjct: 85 AFWAALTLTSMICLASFILSFVALADL-LHMTGQPRELSYLFPVIIDGTILQATISILWL 143 Query: 136 SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIARE 195 + + V A +A A V+ P +P I Sbjct: 144 AGN-DDRGKERRFFWTVLAVAAGVS---IAGNALHAW-VSHAPDFDP-LLAAAISTIPPI 197 Query: 196 AAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEG 250 + A + L + T + ++ L + A A+++ + Sbjct: 198 SLLAASHGLTILARTPKRAPAGEGSSGTSSPLTTISDESVRDAPEAELVVAGMDP 252 Score = 70.7 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 12 TRFFRGWLAAGTSASILGNVTHALLDS-DAGSPVVAAALAAVAPLALLGATHGVHKLVQS 70 RFF LA SI GN HA + P++AAA++ + P++LL A+HG+ L ++ Sbjct: 153 RRFFWTVLAVAAGVSIAGNALHAWVSHAPDFDPLLAAAISTIPPISLLAASHGLTILART 212 Query: 71 R 71 Sbjct: 213 P 213 >UniRef50_UPI0001BC2C5D hypothetical protein BlinB_03557 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2C5D Length = 283 Score = 103 bits (256), Expect = 7e-21, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 11/205 (5%) Query: 74 GGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALL 133 G + + + T+ +A AF LSF AL +LA G+A + A++ PL++D I +TIA++ Sbjct: 8 GWSVITAACGTIGIALGAFWLSFTALADLARR-SGIASSQAWVWPLLVDGLIVVATIAVV 66 Query: 134 ALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIA 193 AL A + + VA A V P +V + Sbjct: 67 ALDG--------RAGAWYPWGLLIAGALVSVAANAMHAVVAAEA--AVPGLLASVIASVP 116 Query: 194 REAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAP 253 A + + ++ + + A D + Sbjct: 117 PLVLLASTHLTVVLIRSAHHHRSSAVDGLEKAERTDAVDPELATVPDRTDGDGDELPLTS 176 Query: 254 SMIARKLQVGYSTVVRILDHHTAQE 278 S +A + + + + Sbjct: 177 STVADLPRSALPSPTPLEPTAESSP 201 Score = 40.3 bits (92), Expect = 0.079, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGSP-VVAAALAAVAPLALLGATHGVHKL 67 + + G L AG S+ N HA++ ++A P ++A+ +A+V PL LL +TH L Sbjct: 71 RAGAWYPWGLLIAGALVSVAANAMHAVVAAEAAVPGLLASVIASVPPLVLLASTHLTVVL 130 Query: 68 VQS 70 ++S Sbjct: 131 IRS 133 >UniRef50_Q06GE1 Putative transmembrane protein n=1 Tax=Rhodococcus sp. NS1 RepID=Q06GE1_9NOCA Length = 379 Score = 94.9 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 55/180 (30%), Gaps = 9/180 (5%) Query: 86 AVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL---SSAERAE 142 + + AF LSF+ L++LA V G + A++ P ++D I G+TIA++ L S + + Sbjct: 29 GITTGAFILSFSVLKDLA-VQGMLPAEHAWIFPAIVDGGILGATIAVIVLSKISGSAKGR 87 Query: 143 VQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAE 202 + V V + A T + A Sbjct: 88 NFFLCLLIAVVFVSVAGNAYHAYRAAQDAA-QTIAGGAILGFNPLAPTVAPIIAVIPPLL 146 Query: 203 PLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARKLQV 262 L + + LV D + + GT P A Sbjct: 147 VLAFTHGIGILIKAIGSAFTEYSELVKAA----DATSTSVAAPDDISGTDPRAAATSAPT 202 >UniRef50_B8HIX1 Putative Trp operon repressor n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HIX1_ARTCA Length = 250 Score = 90.7 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 11/173 (6%) Query: 71 RIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 + SL + +A ++F LSF L + A W G+ + +LVP+V+D +I + Sbjct: 7 PDSRTMVMLSLALVGVLALASFTLSFLGLIQ-AAAWAGIPEYLRWLVPIVVDSTILVYAV 65 Query: 131 ALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVAD 190 A +S +RA + A V + G +A Sbjct: 66 A----ASVQRARGESTTLSWMAVAFFTLVSVLANGAHVLAPSGVARDLDSTVIFGAFLA- 120 Query: 191 LIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQV 243 A V+ + + A + + + DR + Sbjct: 121 -----AIMPVSLFFATETTVNLVVAPAYGSVAQRRKRARDQLVHADRMDHGKD 168 >UniRef50_A4TG29 Putative uncharacterized protein n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TG29_MYCGI Length = 349 Score = 89.2 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 9/172 (5%) Query: 72 IIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIA 131 + A + ++ IT VA+++F LSFA+L +LA G +A L P+++DL+I +T+A Sbjct: 45 AVRVACIVAVLITAVVAAASFVLSFASLADLAQR-SGYPAELAKLWPVIVDLTIVLATVA 103 Query: 132 LLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADL 191 ++ L A H V A + A + Sbjct: 104 VIVLGPAGVGSRAHRRYFWAVLAISAIIS---IGGNALHGYLPPDTALWP--WLAACIAA 158 Query: 192 IAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQV 243 +A + A + S A S A AA VD A+ Sbjct: 159 VAPLSLLATVHGAATMLRIS---AFVSRRAPAADASVDTPTAEAPIAEAQDT 207 Score = 59.9 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGS-PVVAAALAAVAPLALLGATHGVHKL 67 + R+F LA SI GN H L D P +AA +AAVAPL+LL HG + Sbjct: 115 RAHRRYFWAVLAISAIISIGGNALHGYLPPDTALWPWLAACIAAVAPLSLLATVHGAATM 174 Query: 68 VQSRIIGGAYVASLWITV 85 ++ + +V Sbjct: 175 LRISAFVSRRAPAADASV 192 >UniRef50_D0LFE9 Putative uncharacterized protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LFE9_GORB4 Length = 300 Score = 86.5 bits (212), Expect = 9e-16, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 10/170 (5%) Query: 80 SLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAE 139 + +++ VA +AFALSF+AL +LA + G + L P+VID+ + ++ +L+ + Sbjct: 24 AAGLSLIVAGAAFALSFSALADLARMTGVFPEPLPGLFPIVIDVFMIQASYSLVVAA--A 81 Query: 140 RAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQA 199 + V A L + A P I A A Sbjct: 82 ADDRGSRNYHWSVLAVTSTVSVALNCYHALAA-----SGDVLPSAVSAAIASIPPLALLA 136 Query: 200 VAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAE 249 L + + + HA V ID + + Sbjct: 137 STHGLIVHLSARRTEQERAPHAPNK---VTSAAPAIDMQSSPLSFPDDDD 183 Score = 41.4 bits (95), Expect = 0.036, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 9 ESATRFFRGWLAAGTSASILGNVTHALLDSDAGSPVV-AAALAAVAPLALLGATHGVHKL 67 + + LA ++ S+ N HAL S P +AA+A++ PLALL +THG+ Sbjct: 85 RGSRNYHWSVLAVTSTVSVALNCYHALAASGDVLPSAVSAAIASIPPLALLASTHGLIVH 144 Query: 68 VQSRIIGGAYVA 79 + +R Sbjct: 145 LSARRTEQERAP 156 >UniRef50_B2HFL8 Phage excisionase n=1 Tax=Mycobacterium marinum M RepID=B2HFL8_MYCMM Length = 201 Score = 83.0 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 5/144 (3%) Query: 103 AVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTETH 162 A V+ +A L P+++D +I +T+A+LAL + + + + V A Sbjct: 4 ATRLAAVSITVAPLWPVIVDGTILSATMAVLALGAYGAQQRANRSFFWWVLALAAMAS-- 61 Query: 163 LVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAV 222 V A + + ++ + A A + + Sbjct: 62 -VGSNALHAIVAPGNELAP--WLKAAIGVVPPVSLLATAHGAAILSRIRPMTVKAARVQQ 118 Query: 223 AAARLVDEGVTRIDRAKVAQVLAE 246 + R A+ + + Sbjct: 119 ETRQAQRAAERRRYWVSTARTIQQ 142 Score = 63.0 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 8 RESATRFFRGWLAAGTSASILGNVTHALLDSDAGS-PVVAAALAAVAPLALLGATHGVHK 66 + + FF LA AS+ N HA++ P + AA+ V P++LL HG Sbjct: 43 QRANRSFFWWVLALAAMASVGSNALHAIVAPGNELAPWLKAAIGVVPPVSLLATAHGAAI 102 Query: 67 LVQSR 71 L + R Sbjct: 103 LSRIR 107 >UniRef50_Q2FSQ8 Putative transcriptional regulator, AsnC family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FSQ8_METHJ Length = 232 Score = 72.6 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Query: 72 IIGGAYVASLWI-TVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 II + ++ + VA AF LS+ LRELA G++ +++ L P+ +D + S+I Sbjct: 4 IIKKVCLGAVALFCAIVAGCAFLLSYTNLRELA-EKAGISSSLSPLWPICLDSLLVVSSI 62 Query: 131 ALLA--LSSAERAEVQHDAQPVHV 152 A+L LS + + Sbjct: 63 AILYNNLSRKGSLRLWAIFIAFSL 86 >UniRef50_Q5Z1Z3 Putative phage recombinase n=1 Tax=Nocardia farcinica RepID=Q5Z1Z3_NOCFA Length = 207 Score = 72.2 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 67/189 (35%), Gaps = 19/189 (10%) Query: 69 QSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGS 128 QS+ + A +++ + +A+ +AF LSFAALR+LA+ +A+L P+++D +I + Sbjct: 7 QSKGVRWARWSAVLVVLAIGGAAFVLSFAALRDLAI-KAHTPTHLAWLFPVIVDGTIIQA 65 Query: 129 TIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTV 188 TIA+LAL+ + A H V + Sbjct: 66 TIAVLALADSPERRWFTGVLAAGAAVSIGGNVAHS--------------LVSGHGYLAAL 111 Query: 189 ADLIAREAAQAVAEPLPLDVETS----TDPALFSTHAVAAARLVDEGVTRIDRAKVAQVL 244 +IA A L + + T S V AA Q + Sbjct: 112 LAVIAPAALLIDTHGLAVLLRTRRASERSEPADSPSVVPAAAPTPTPRPAAASVPTPQAV 171 Query: 245 AEHAEGTAP 253 A P Sbjct: 172 AVSPVPVRP 180 >UniRef50_B8HHK6 Putative uncharacterized protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HHK6_ARTCA Length = 206 Score = 70.7 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 6/160 (3%) Query: 70 SRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGST 129 + + + TV +A AF LSFA+L +LA G+ ++++ P+++D I +T Sbjct: 9 APLSRPIIAVGIGSTVLIAVGAFVLSFASLTDLAAR-SGIDRNLSWIWPIIVDGLIVAAT 67 Query: 130 IALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVA 189 +A++AL+ + + A P + T A A V V P V Sbjct: 68 VAIVALAGH---DRKTLAYPWALLFLGAVVSTAANAVHAIVSVDQAHGGV--PPVISAVM 122 Query: 190 DLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVD 229 + A+ L V+ + V ++ V Sbjct: 123 AAMPPVVLLAITHLTVLLVQKAAPAPAAKKKPVKSSAPVR 162 >UniRef50_C7NLQ5 Putative uncharacterized protein n=2 Tax=Micrococcineae RepID=C7NLQ5_KYTSD Length = 311 Score = 63.4 bits (152), Expect = 8e-09, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 11/158 (6%) Query: 78 VASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSS 137 V ++ TV +A+ AF LSF AL +LA GV + A+ PL++D I +++ Sbjct: 2 VTAVAGTVFIAAGAFWLSFTALADLAAR-SGVGGSQAWAWPLIVDGII--------VVAT 52 Query: 138 AERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAA 197 + + A + V A V V + A A Sbjct: 53 VAVVAMAGQRSAWYPWALLIGGAAVSVTANALHAVVAADADVPGVLAAAVAAVPPVVLLA 112 Query: 198 QAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRI 235 + + A D TR Sbjct: 113 I--THLTVILTRPQRLTDASVSRDDAVVEQEDRPGTRR 148 >UniRef50_C5C9M1 Putative uncharacterized protein n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9M1_MICLC Length = 383 Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 45/165 (27%), Gaps = 9/165 (5%) Query: 71 RIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 G A + T AF++SFAAL E+A W G+ P + + VP+ IDL+I Sbjct: 70 PNDGRFIRAVVAGTAVAGLVAFSISFAALYEVAA-WLGLPPFMHWAVPVFIDLAILVYAG 128 Query: 131 ALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVAD 190 ++L + + A + Sbjct: 129 SVLV----HESRGESARASWWALGAFTGLSMIANGAHAW----SAENASVWQSVVGALIA 180 Query: 191 LIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRI 235 ++ A L + D + + Sbjct: 181 VMVPVAVFVATNQLARVAVENPDSRRAERASQVSEEAEQLKAQAE 225 >UniRef50_UPI0001BC2B98 hypothetical protein BlinB_20437 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2B98 Length = 359 Score = 60.3 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 59/192 (30%), Gaps = 12/192 (6%) Query: 81 LWITVAVASS-AFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAE 139 + I VA A AFA+SF AL E+A W G+ + + VP ID +I ++L Sbjct: 73 ITIGVAFAGLVAFAISFVALMEVAS-WLGLPEWMHWAVPAFIDTAILVYAGSILI----H 127 Query: 140 RAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQA 199 + + Q + A A + A V + A A Sbjct: 128 KTRGEKTWQSWVLLAAFSGLSVIANVAHAL--TYGDATEGSWQGLIGAVIAGMVPFAVFA 185 Query: 200 VAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARK 259 E L S A K +V AE + +AR+ Sbjct: 186 ATEQLSRVA----VEDPISRRREKQAEAEWLAEQAERERKQLEVEAEREAARQEAELARE 241 Query: 260 LQVGYSTVVRIL 271 VVR Sbjct: 242 QHATNLEVVRAQ 253 >UniRef50_O64228 Gene 34.1 protein n=5 Tax=Siphoviridae RepID=VG341_BPMD2 Length = 145 Score = 59.1 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 47/137 (34%), Gaps = 21/137 (15%) Query: 73 IGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIAL 132 A + TVAV AF+LSF AL EL+ G A +++VPLVID I +T+A Sbjct: 7 DKVALKVATAGTVAVGGLAFSLSFTALSELSAANGV---AQSWMVPLVIDGGILVATMAT 63 Query: 133 LALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLI 192 +ALS + A + + VA V I Sbjct: 64 VALSRHG----------WYAWALLILSSLMSVAGNVAHA--------QPHGLIAMVIAAI 105 Query: 193 AREAAQAVAEPLPLDVE 209 A L Sbjct: 106 PPLWLLASTHLTVLLYR 122 >UniRef50_Q1EQR2 Putative uncharacterized protein n=1 Tax=Streptomyces kanamyceticus RepID=Q1EQR2_STRKN Length = 380 Score = 54.9 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 58/185 (31%), Gaps = 3/185 (1%) Query: 69 QSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGS 128 S + V + + ++ FA S+ ALR++A+ P++++L P+ ID I Sbjct: 16 GSHELRRMCVWDRAAIILLGAAGFAFSYDALRQVAIAIHA-RPSLSYLFPVFIDGFIAYG 74 Query: 129 TIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTV 188 AL+ L + + A L A + + +H R V V Sbjct: 75 VRALVLLRHSGFGARMYAWFLFLAATGSSLWANALHAITLNRGPQSGSSALHLEDRVVGV 134 Query: 189 ADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHA 248 +A A + T+ V E V + Sbjct: 135 LSTLAPLALAGSVHLYIIMARTAESSVPD--RFKTRPEPVREAVRTERTSATEDQFERGW 192 Query: 249 EGTAP 253 G AP Sbjct: 193 SGAAP 197 >UniRef50_C9YVA9 Putative membrane protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YVA9_STRSW Length = 284 Score = 53.7 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 54/188 (28%), Gaps = 9/188 (4%) Query: 82 WITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERA 141 V + AFALS+ ALR++AV + + + PLVID I ALL L +A Sbjct: 10 LGVALVGTIAFALSYDALRQMAVAI-HIRGVLTYAFPLVIDGFIAIGVAALLILRTAP-- 66 Query: 142 EVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTA-QPVHEPVRGVTVADLIAREAAQAV 200 + + T A A L +H V IA A Sbjct: 67 -WRSRLYVWALVGLATVTSIWANALHAIRLNQQARTAGLHLDDITVGALSAIAPLALAGA 125 Query: 201 AEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARKL 260 + AA G + R + + P + Sbjct: 126 VHLDLVIRR----HPTPRAQEAAATTSQTVGHSHNGRHSAEPPARSDDQTSLPKKVRCSP 181 Query: 261 QVGYSTVV 268 V V Sbjct: 182 DVAERADV 189 >UniRef50_UPI0001B4C985 hypothetical protein SlivT_16287 n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4C985 Length = 269 Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 54/181 (29%), Gaps = 8/181 (4%) Query: 82 WITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERA 141 V + FALS+ ALR++AV + + + PLVID I ALL L +A Sbjct: 8 LGVALVGTIGFALSYDALRQMAVAI-HIRGVLTYAFPLVIDGFIAIGVAALLILRAAP-- 64 Query: 142 EVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVT-AQPVHEPVRGVTVADLIAREAAQAV 200 + + T A A L + A +H V IA A Sbjct: 65 -WRSRLYVWALVGIATITSIWANALHAVRLNQESDAAGLHLDDVTVGALSAIAPLALAGA 123 Query: 201 AEPLPLDVET---STDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIA 257 + S + D A ++ A+ IA Sbjct: 124 VHLDLVIRRHPTGRHSTEPVSAQRHTHVENLLRPAPDSDTADASKGSAQARPEVVAEDIA 183 Query: 258 R 258 Sbjct: 184 D 184 >UniRef50_A7TUS9 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=A7TUS9_STRLI Length = 355 Score = 51.4 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 63/195 (32%), Gaps = 18/195 (9%) Query: 82 WITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERA 141 VA+ + ALS+ AL+++AV + + + PLVID I ALL L Sbjct: 18 AAVVALGGAGCALSYDALQQMAVAI-HIRGFLTYSFPLVIDGFIAYGIRALLVL------ 70 Query: 142 EVQHDAQPVHVAAQPVHTETHLVAHEADGLVH-----VTAQPVHEPVRGVTVADLIAREA 196 ++V + A V VT + V V IA A Sbjct: 71 RNAPLRARLYVWTLFGTATAASIWANALHAVRINQDTVTGTGLRLGDAVVAVLSTIAPLA 130 Query: 197 AQAVAEPLPLDVE---TSTDPALFS--THAVAAARLVDEGVTRIDRAKVAQVLAEH-AEG 250 L TD H R VTR DRA + A G Sbjct: 131 LAGAVHLYILIARGPVKDTDRQNLGQPGHLGQTDRGDAAEVTRTDRAGQPRSAAGQVKSG 190 Query: 251 TAPSMIARKLQVGYS 265 + + + +L + + Sbjct: 191 QSVTALTDRLPLSPT 205 >UniRef50_D1XKZ8 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=D1XKZ8_9ACTO Length = 257 Score = 50.3 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 55/172 (31%), Gaps = 3/172 (1%) Query: 82 WITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERA 141 +A +AFALS+ ALR++A + A+ + PLVID I ALL L +A + Sbjct: 22 TGVSLLAVAAFALSYDALRQMAAA-SHIHRALTYAFPLVIDGFIAIGIGALLILRTAPLS 80 Query: 142 EVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVA 201 + + V VA L A + T + + G V IA A Sbjct: 81 ARLYVSALVGVATATSIWANVLHAVRLNQQTRHTNLALDDITVG--VISAIAPLALAGAV 138 Query: 202 EPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAP 253 L T ++ R + P Sbjct: 139 HFYLLVARRPTATDRHNSGDRHEPRAEHTIGKLAPPHATDTDTDVPQQPGKP 190 >UniRef50_UPI0001AECAEC hypothetical protein SalbJ_16722 n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AECAEC Length = 252 Score = 49.1 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 4/191 (2%) Query: 83 ITVAVASSAFALSFAALRELAVVWG-GVAPAIAFLVPLVIDLSITGSTIALLALSSAERA 141 + V + + AF LS+A L ++A G G +P + P +D I + +L + Sbjct: 8 VIVVLTAGAFWLSYAHLADVAGQHGLGASPIRRWAWPATLDAFIVAGELLMLRAALRRTT 67 Query: 142 EVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVA 201 ++ A V + + V+ V V Q Sbjct: 68 DLWAVAVTVAGSVGSIALNVAGVSGADSERSVPLLDYVVAAVPPAAAMVAFGVLMRQIHQ 127 Query: 202 EPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARKLQ 261 P D +S V EG + A+V Q E + P + K Sbjct: 128 LVAPNDAPSSIGSVAVRNRLVGE---HGEGRRQDAAAEVPQASGEERSESTPPVPEAKPV 184 Query: 262 VGYSTVVRILD 272 G I + Sbjct: 185 GGRPPKATIAE 195 >UniRef50_C9ZFD0 Putative membrane protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZFD0_STRSW Length = 283 Score = 48.7 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 6/189 (3%) Query: 69 QSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIA-FLVPLVIDLSITG 127 + A +A+ + VA+ +S F LS+A L E+A G + + + P +D I Sbjct: 23 KQAAERYALIAAGVVIVALTASGFWLSYAHLAEVAGQHGLKSSPVRQWAWPATLDAFIVA 82 Query: 128 STIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVT 187 + +L + A + + V+ V Sbjct: 83 GELLMLRAGLRRVTDGWAIALTATGSVGSIALNVAGVSGTGKASAVPLLDYVVA--AVPP 140 Query: 188 VADLIAREAAQAVAEPLPLD---VETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVL 244 A L+A L + AA E V + V Sbjct: 141 TAALLAFGVLMRQIHQLVDQPAGHPDAASVQAPVRPVTGAAEPSTEPVRPTEPPAAGSVQ 200 Query: 245 AEHAEGTAP 253 Sbjct: 201 PTEPPPEVS 209 >UniRef50_B4V8X2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V8X2_9ACTO Length = 277 Score = 48.0 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 56/193 (29%), Gaps = 8/193 (4%) Query: 82 WITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERA 141 +A+ S+ ALS+ AL+++AV V + +L PLVID I ALL L A Sbjct: 24 AAVLALGSAGCALSYDALQQMAVAI-HVRGLLTYLFPLVIDGFIAYGVRALLVL---HEA 79 Query: 142 EVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQ--PVHEPVRGVTVADLIAREAAQA 199 + + + A L T + V + IA A Sbjct: 80 PFRARLYVWTLFGTATIASIWANSLHAIRLNQQTGNDSGLRLGDTTVGILSTIAPLALAG 139 Query: 200 VAEPLPLDVE--TSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIA 257 L +PA A + A + + + Sbjct: 140 AVHLHILITRRARGAEPAESGAGLPAYTTRPEASAPTAPEAVPPSTVPQASTRDQGGDPP 199 Query: 258 RKLQVGYSTVVRI 270 + R+ Sbjct: 200 AHEPTSRTPSRRV 212 >UniRef50_UPI0001B54ED7 hypothetical protein SSPB78_17679 n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B54ED7 Length = 280 Score = 47.6 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 52/196 (26%), Gaps = 13/196 (6%) Query: 82 WITVAVASSAFALSFAALRELAVVWG-GVAPAIAFLVPLVIDLSITGSTIALLALSSAER 140 + +A+ + F LS+A L ++A G G +P + P +D I + +L Sbjct: 46 TVIIALTAGGFWLSYAHLAQVAGQHGLGSSPVRQWAWPATLDAFIVAGELLMLRAGLRRV 105 Query: 141 AEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAV 200 + + + V+ + V V A L+A Sbjct: 106 TDWWAVTLTATGSVGSIALNVAGVSGTGNASVVPLLDYVVA--AVPPTAALLAFGVLMRQ 163 Query: 201 AEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARKL 260 L A + A + T P I+R Sbjct: 164 IHQLVDRPLDRPALNSAEAPEPRATPSERIANPQ----------ATDSSPTPPPRISRGQ 213 Query: 261 QVGYSTVVRILDHHTA 276 G V ++ Sbjct: 214 PRGGRPVSATVEELVE 229 >UniRef50_D1SIS3 Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SIS3_9ACTO Length = 337 Score = 47.2 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 81/244 (33%), Gaps = 9/244 (3%) Query: 16 RGWLAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVHKLVQSRIIGG 75 R L G +ASI NV HA +++ +AA PLALL + ++ R Sbjct: 34 RAVLTLGVAASIAANVLHA------RPNLISQLIAAWPPLALLLTVELISRVPSHRRSLA 87 Query: 76 AYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLAL 135 A +A + +S+ + +A +G + ++L+P+ +D + ++I+L+ + Sbjct: 88 ALRLLATAAIAGIAG--WVSYWHMVGVAARYGEIDAGASYLLPISVDGLVVVASISLVEI 145 Query: 136 SSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHE-PVRGVTVADLIAR 194 + RA AA H + AD + E +A + Sbjct: 146 TGRIRAGTGRPTPTQQPAAPQERLGHHALRAGADRTTRRRMPRLAETVTETKPMATSASP 205 Query: 195 EAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPS 254 A T D A + + A H T + Sbjct: 206 GAVSTPVPSRGKAASTQGDGAPDRPAQPDRDDVRGDSEPSRPAGDRAGGTPTHDAKTPAT 265 Query: 255 MIAR 258 + + Sbjct: 266 IPSD 269 >UniRef50_D1WVV6 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=D1WVV6_9ACTO Length = 270 Score = 47.2 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 62/205 (30%), Gaps = 3/205 (1%) Query: 66 KLVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWG-GVAPAIAFLVPLVIDLS 124 +A+ + +A+ + +F LS+A L E+A G G +PA + P +D Sbjct: 5 SPAPHPADRYVLLAAGAVILALTAVSFWLSYAHLAEVAGEPGLGNSPARMWAWPAALDAF 64 Query: 125 ITGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVR 184 + + +L R + A + + V D V Sbjct: 65 LVAGELLMLRAGLRRRPDWWAIALTATGSLGSIALNVAGVTGTRDPADVPVLDYVVA--A 122 Query: 185 GVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVL 244 A L+A T+P + A + EG A Sbjct: 123 VPPTAALLAFGVLMHQIHQHLGQPNRETNPDRLLSTGPAVTEHLREGDRPRPHPVPAPSA 182 Query: 245 AEHAEGTAPSMIARKLQVGYSTVVR 269 E A+ A + A + V V R Sbjct: 183 TEDADRAAEAAAADEPPVRPRKVGR 207 >UniRef50_UPI0001AF1564 hypothetical protein SrosN15_18272 n=1 Tax=Streptomyces roseosporus NRRL 15998 RepID=UPI0001AF1564 Length = 249 Score = 46.0 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 46/155 (29%), Gaps = 11/155 (7%) Query: 95 SFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEVQHDAQPVHVAA 154 S+ ALR++A + PA+ + PLVID I +LL L +A + + V+A Sbjct: 20 SYDALRQMAAA-SHIHPALTYAFPLVIDGFIAIGIGSLLVLRTAPLSARLY------VSA 72 Query: 155 QPVHTETHLVAHEADGLVH----VTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVET 210 + + + V IA A L Sbjct: 73 LVGIATATSIWANVLHAIRLNQQNRRSALALDDLTVGAISAIAPLALAGAVHLYLLVQRR 132 Query: 211 STDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLA 245 T A ++GV +A Sbjct: 133 PTRTEPHPEPHNDGATSPEDGVPPTPAPVPDADVA 167 >UniRef50_Q2LEQ5 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=Q2LEQ5_9ACTO Length = 600 Score = 43.7 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 1/126 (0%) Query: 66 KLVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSI 125 K + R++ + + V FA+S++ L ++A+ W G +P +A P+ +D SI Sbjct: 42 KPTRDRLMTALSLVAAVGGTLVGVIGFAMSYSTLAKVALSW-GFSPELAPWFPVGVDASI 100 Query: 126 TGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRG 185 L L A + + A V + V + Sbjct: 101 IAFLALDLYLIRKNTAWPLLRMAAHAMTGATIWFNASSQGQIASDPVQAASHGVMPVLFV 160 Query: 186 VTVADL 191 + V Sbjct: 161 IGVEAA 166 >UniRef50_D1A5E1 Putative uncharacterized protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A5E1_THECD Length = 366 Score = 43.7 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 66/202 (32%), Gaps = 10/202 (4%) Query: 79 ASLWITVAVA--SSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALS 136 +L +A AF L++ LR LA+ G A L P+++D+ I T+ +LAL Sbjct: 3 TALAGLGVIASLGGAFVLTYDDLRVLALAGGAAPRW-APLYPVLVDVLI---TVTVLALV 58 Query: 137 SAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREA 196 A A + V A P GV VA + Sbjct: 59 VARHARWWTRWIRWALLLAVVAGAAAAAVQRAVKGYEPL--PDDALKAGVAVAPYVMLIV 116 Query: 197 AQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMI 256 + + + + PA A V+ T+ + A V A + Sbjct: 117 VVWLWLAMFRQIHRTAPPAPAPPPAEPVTGPVEAAPTQTAEVETAPVEAAAPPLALAAAR 176 Query: 257 ARK--LQVGYSTVVRILDHHTA 276 + + L G R + HTA Sbjct: 177 SDEAWLFGGADDDRRADEEHTA 198 >UniRef50_Q6XMV8 Putative uncharacterized protein n=1 Tax=Rhodococcus erythropolis RepID=Q6XMV8_RHOER Length = 356 Score = 43.3 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 53/194 (27%), Gaps = 9/194 (4%) Query: 93 ALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEVQHDAQPVHV 152 LSF ALR LA+ V P A++ P+ ID++ +T A + + + Sbjct: 42 TLSFDALRALAIEIN-VHPGRAWMAPVAIDVAQAAAT-AGYVIFRVANRYTWARRYCMTL 99 Query: 153 AAQPVHTETHLVAHEADGLV---HVTAQPVHEPVRGVTVADLIAREAAQAVAEPLPLDVE 209 A V ++ + L + A AA L L Sbjct: 100 AVVTVALSVVGNSYHSYQLAARNLARVAAGDILDFIPQPPAIAAVIAAIFPLLWLALFHL 159 Query: 210 TSTDPALFSTHAVAAARLVDEGVTRID----RAKVAQVLAEHAEGTAPSMIARKLQVGYS 265 + + A E E + + + S Sbjct: 160 FTMMLQVVIDKRAQHRGAATTHHVAQRENNIAAPTLTFTEEATEPESTLVAIATPESAVS 219 Query: 266 TVVRILDHHTAQEV 279 TV HHT + Sbjct: 220 TVRATDAHHTTRGA 233 >UniRef50_A8SEN9 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEN9_9FIRM Length = 477 Score = 42.6 bits (98), Expect = 0.014, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 33/148 (22%), Gaps = 8/148 (5%) Query: 135 LSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAR 194 + + V A V + V A Sbjct: 1 MKKRFDRSGTARRKAVTAIAALTMALVLAVGGAGAATLLSAQPETLTVGAVVPHVTAEAP 60 Query: 195 EAAQAVAEPLPLDVETS-TDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEH-----A 248 + + + + A ST A V E + + A+ A E Sbjct: 61 QQTAPADPAPAAESTATAPEQAAESTAQPQQAESVPEQAKKPETAETAPAEPEESAAAPE 120 Query: 249 EGTAPSMIA--RKLQVGYSTVVRILDHH 274 P+ A L+ S + + + Sbjct: 121 TPETPAQPAGDAALEEENSPAMLLEETP 148 >UniRef50_UPI00016C5093 hypothetical protein GobsU_26411 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5093 Length = 590 Score = 42.6 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 21/181 (11%) Query: 91 AFALSFAALRELAVVWGGVAPAIAFL----VPLVIDLSITGSTIALLALSSAERAEVQHD 146 A LSFA L L + ++ A++ P V+ + + +++ L+ Sbjct: 238 AHLLSFAVLFSLTGLIFALSSWPAWMRVIGGPWVV--VMVFADVSMWWLARLCDEYGPFF 295 Query: 147 AQPVHVAAQPVHTETH-LVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAEPLP 205 A V + +A + + + V + V A Sbjct: 296 AMAVILTGFLAAVGLFVHIAGSLFTMYGLKGRVVIGLLFVVGAVAGGA----------FV 345 Query: 206 LDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKV----AQVLAEHAEGTAPSMIARKLQ 261 + P AA D G I + +V + + + E P ++ K Sbjct: 346 TKLLVPALPKPKVEDKQAADPEPDAGKPEIKKPEVKKPEDKKMEDKKEPFVPVVVTPKKP 405 Query: 262 V 262 + Sbjct: 406 I 406 >UniRef50_D1S9S3 Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S9S3_9ACTO Length = 396 Score = 42.6 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 72/243 (29%), Gaps = 26/243 (10%) Query: 9 ESATRFFRGW---LAAGTSASILGNVTHALLDSDAGSPVVAAALAAVAPLALLGATHGVH 65 TR LA G +ASI NV HA +++ +AA PLALL + Sbjct: 23 RHLTRLRWAVRAVLALGVAASIAANVLHA------RPNLISQVIAAWPPLALLLTVELIS 76 Query: 66 KLVQSRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSI 125 ++ R G A L +A A +S+ + +A +G A ++L+P+ +D + Sbjct: 77 RVPAYR--RGLAAARLIAAAVIAGIAAWVSYWHMVGVAARYGETDAAASYLLPISVDGLV 134 Query: 126 TGSTIALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRG 185 ++I+L+ ++ A P Sbjct: 135 VVASISLVEIAGR---------------IHSPSVSRGDGQQPATTPTETPFPTAEPPSLK 179 Query: 186 VTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLA 245 +A QA + A D +VA Sbjct: 180 APAPASGPPQARQARGFDVSPTDRPQAAIRGDEGERSNADATGHSPTDARDTKEVAPEPP 239 Query: 246 EHA 248 Sbjct: 240 RDE 242 >UniRef50_C7Q5J6 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q5J6_CATAD Length = 263 Score = 41.8 bits (96), Expect = 0.028, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 46/190 (24%), Gaps = 10/190 (5%) Query: 70 SRIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGST 129 A IT +A F SF + LA V I +LV +DLS+ G Sbjct: 8 IPGEALTRRAVTTITGVIAGLTFVFSFGNVAALAAYL-HVPLYIGWLVGPAVDLSVVGLL 66 Query: 130 IALLALSSAERAEVQ----HDAQPVHVAAQPVHTETHLVAHEADG-LVHVTAQPVHEPVR 184 + + LS + Q + + G P+ Sbjct: 67 LGIRYLSLHGYTDKQLEKPRRLLILCGLLTMALNTAESICAGRYGTAAFDAVAPLLLLGW 126 Query: 185 GVTVADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVL 244 L+ + + + A + ++D + Q Sbjct: 127 SENGPWLLRQIYTVRSLHAATGPGPAAAEQASATAVV----PVLDNADSGPAEPPAGQDE 182 Query: 245 AEHAEGTAPS 254 G Sbjct: 183 PAQQAGIGED 192 >UniRef50_C9Z8K5 Putative SpdA-like protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z8K5_STRSW Length = 250 Score = 41.0 bits (94), Expect = 0.045, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 42/192 (21%), Gaps = 10/192 (5%) Query: 84 TVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEV 143 + A A ALSF+ L +LA G A+ P+ +DL + + + A Sbjct: 10 VIVQAVIAGALSFSHLHDLAAA-AGQGGWKAWAYPVSVDLLLVAAWRRMRQAQEAGEGTG 68 Query: 144 QHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADLIAREAAQAVAEP 203 + A + H P V A Sbjct: 69 GPRLWFLVALAASLGANVATAG---------LLDLDHVPAWLRVVVAGWPAVAFFGGTLL 119 Query: 204 LPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHAEGTAPSMIARKLQVG 263 P ++ + A + Sbjct: 120 AHAPHHPRQRPVASVPSTTGPHDEPPAVPPAVEVPDRDTLPASPTVPVSDPTPEPTTSEP 179 Query: 264 YSTVVRILDHHT 275 +T + HT Sbjct: 180 ATTSAEPVADHT 191 >UniRef50_B1W4S8 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=B1W4S8_STRGG Length = 288 Score = 41.0 bits (94), Expect = 0.045, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 9/129 (6%) Query: 74 GGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALL 133 + V V + AF +S+ AL+++A G A L P V+D + + +A L Sbjct: 3 RWGKSLLIAALVGVVAMAFRVSWNALKDVATAT-GADETAATLYPFVVDGLMALALVATL 61 Query: 134 ALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGL--VHVTAQPVHEPVRGVTVADL 191 L+ R + V A L L Sbjct: 62 VLTGDAR------RFALRVLAAYTLASLVLNYVHGLVPELHDEVVDWGRLADWDPANWAL 115 Query: 192 IAREAAQAV 200 + + V Sbjct: 116 VLLATSLPV 124 >UniRef50_B5H3A0 Transmembrane protein n=9 Tax=Bacteria RepID=B5H3A0_STRCL Length = 372 Score = 41.0 bits (94), Expect = 0.051, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 26/84 (30%) Query: 88 ASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIALLALSSAERAEVQHDA 147 A+ A ALSF L G+ +LVP +D + ++ + +S A + Sbjct: 69 AAVAAALSFHGLVGFGRQNLGLTGGWEYLVPFGLDGAAMFCSVLAVREASHGDAALGSRL 128 Query: 148 QPVHVAAQPVHTETHLVAHEADGL 171 A D Sbjct: 129 LVWTFAGAAAWFNWVHAPRGVDHA 152 >UniRef50_B5HVL8 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HVL8_9ACTO Length = 363 Score = 40.6 bits (93), Expect = 0.053, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 55/183 (30%), Gaps = 13/183 (7%) Query: 71 RIIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTI 130 + +A + V V AF +S+ ALR++A G A L P V+D + + + Sbjct: 66 PMNRTGRIALVLALVGVVGMAFRVSWNALRDIANAV-GADQTAATLYPFVVDGLMALALV 124 Query: 131 ALLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVH--VTAQPVHEPVRGVTV 188 A L L+ +R + V L T Sbjct: 125 ATLVLAGRDRT------FALRVLGTYTAASLVLNYVHGLVPALHGATVDWGRLADWDPAN 178 Query: 189 ADLIAREAAQAVAEPLPLDVETSTDPALFSTHAVAAARLVDEGVTRIDRAKVAQVLAEHA 248 L+ A + P+ S A H A D +V + A+ Sbjct: 179 WALV----LLATSLPVGSIYFGSDLVAKVLHHRPAPIPTADTNAEESTETEVNRSTADLP 234 Query: 249 EGT 251 E T Sbjct: 235 EST 237 >UniRef50_Q2J7P8 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7P8_FRASC Length = 382 Score = 40.3 bits (92), Expect = 0.067, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 7/120 (5%) Query: 72 IIGGAYVASLWITVAVASSAFALSFAALRELAVVWGGVAPAIAFLVPLVIDLSITGSTIA 131 ++A++ + VA A +S+ +R +A++ G PA A ++PL +D I +++ Sbjct: 144 GDLWIHIATVIAVLGVAGIAAVVSYRHMRAVAILH-GENPANAAIIPLSVDGLIVAASMT 202 Query: 132 LLALSSAERAEVQHDAQPVHVAAQPVHTETHLVAHEADGLVHVTAQPVHEPVRGVTVADL 191 +LA H + + +A A V + Sbjct: 203 MLA------DSRAHRHRSWLAYSLLTLASAASLAANVMHAEPTLAARVIAAWPSAALIGA 256 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.116 0.286 Lambda K H 0.267 0.0358 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 998,757,874 Number of Sequences: 3077464 Number of extensions: 25506039 Number of successful extensions: 269377 Number of sequences better than 1.0e-01: 851 Number of HSP's better than 0.1 without gapping: 87 Number of HSP's successfully gapped in prelim test: 1051 Number of HSP's that attempted gapping in prelim test: 267249 Number of HSP's gapped (non-prelim): 2590 length of query: 281 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 154 effective length of database: 649,558,428 effective search space: 100031997912 effective search space used: 100031997912 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 92 (40.2 bits)