Return to main results Retrieve Phyre Job Id

Job DescriptionASR85483.1_membrane_protein_[Mycobacterium_phage_Cain]
Confidence35.87%DateMon Jun 7 16:50:03 BST 2021
Rank16Aligned Residues34
% Identity15%Templatec1u78A_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
Resolution2.69 Å
Model Dimensions (Å)X:20.184 Y:21.204 Z:18.894

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260.........270.
Predicted Secondary structure 












Query SS confidence 

































Query Sequence  AKVAQVLAEHAEGTAPSMIARKLQVGYSTVVRIL
Query Conservation 
 

  


    



 

 
 






 

 
Alig confidence 

































Template Conservation    
  
  
   
 
   

  

 
  

   
Template Sequence  TERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYL
Template Known Secondary structure  TT

T

Template Predicted Secondary structure 






Template SS confidence 

































   10.........20.........30.........40...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D