Phyre Home Retrieve Phyre Job Id
Emailhurlbertj@winthrop.edu
DescriptionASR85416.1_tail_terminator_[Mycobacterium_phage_Cain]
DateMon Jun 7 16:50:02 BST 2021
Unique Job IDc321ccfb25c09133
SequenceMTVLVPPVGP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.852 Y:45.568 Z:18.646
Model (left) based on template d1pnoa_
Top template information
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Transhydrogenase domain III (dIII)
Confidence and coverage
Confidence: 36.5% Coverage: 26%
37 residues ( 26% of your sequence) have been modelled with 36.5% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1pnoa_



36.5 27
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Transhydrogenase domain III (dIII)
2c2bruC_



30.7 35
PDB header:oxidoreductase
Chain: C: PDB Molecule:nad(p) transhydrogenase subunit beta;
PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase
3d1d4oa_



27.9 24
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Transhydrogenase domain III (dIII)
4c1pt9B_



27.4 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial;
PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue
5d1tmqb_



25.4 24
Fold:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Superfamily:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Family:Proteinase/alpha-amylase inhibitors
6d1beaa_



23.5 29
Fold:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Superfamily:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Family:Proteinase/alpha-amylase inhibitors
7c4cvwD_



23.0 23
PDB header:hydrolase/hydrolase inhibitor
Chain: D: PDB Molecule:limit dextrinase inhibitor;
PDBTitle: structure of the barley limit dextrinase-limit dextrinase2 inhibitor complex
8c2lzqA_



22.5 70
PDB header:viral protein
Chain: A: PDB Molecule:ns2 peptide;
PDBTitle: structure of ns2(32-57) gbvb protein
9c3kwrA_



20.5 67
PDB header:rna binding protein
Chain: A: PDB Molecule:putative rna-binding protein;
PDBTitle: crystal structure of putative rna-binding protein (np_785364.1) from2 lactobacillus plantarum at 1.45 a resolution
10d2dbsa1



16.8 45
Fold:TTHC002-like
Superfamily:TTHC002-like
Family:TTHC002-like
11c7a24z_



16.4 15
PDB header:membrane protein
Chain: Z: PDB Molecule:b16.6;
PDBTitle: assembly intermediate of the plant mitochondrial complex i
12c6yaqA_



14.5 10
PDB header:flavoprotein
Chain: A: PDB Molecule:cytokinin dehydrogenase 8;
PDBTitle: crystal sttructure of zmcko8 in complex with inhibitor 1-(3-chloro-5-2 trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
13c4agyA_



10.8 8
PDB header:virus
Chain: A: PDB Molecule:vp1 protein;
PDBTitle: coxsackievirus a7 (cav7) empty capsid reconstruction at 6.092 angstrom resolution.
14c6yjiA_



9.9 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:fad-binding pcmh-type domain-containing protein;
PDBTitle: structure of fgceldh7c
15c3h1yA_



9.6 19
PDB header:isomerase
Chain: A: PDB Molecule:mannose-6-phosphate isomerase;
PDBTitle: crystal structure of mannose 6-phosphate isomerase from salmonella2 typhimurium bound to substrate (f6p)and metal atom (zn)
16c3lkxB_



9.0 32
PDB header:chaperone
Chain: B: PDB Molecule:nascent polypeptide-associated complex subunit alpha;
PDBTitle: human nac dimerization domain
17d1lkta_



8.9 10
Fold:Head-binding domain of phage P22 tailspike protein
Superfamily:Head-binding domain of phage P22 tailspike protein
Family:Head-binding domain of phage P22 tailspike protein
18d1br2a1



8.8 47
Fold:SH3-like barrel
Superfamily:Myosin S1 fragment, N-terminal domain
Family:Myosin S1 fragment, N-terminal domain
19c3mxtA_



8.6 28
PDB header:ligase
Chain: A: PDB Molecule:pantothenate synthetase;
PDBTitle: crystal structure of pantoate-beta-alanine ligase from campylobacter2 jejuni
20c2g7rA_



8.4 63
PDB header:hydrolase
Chain: A: PDB Molecule:mucosa-associated lymphoid tissue lymphoma translocation
PDBTitle: x-ray structure of the death domain of the human mucosa associated2 lymphoid tissue lymphoma translocation protein 1
21d2o5ha1



not modelled 8.0 44
Fold:NMB0513-like
Superfamily:NMB0513-like
Family:NMB0513-like
22c1n2dC_



not modelled 8.0 27
PDB header:cell cycle
Chain: C: PDB Molecule:iq2 and iq3 motifs from myo2p, a class v myosin;
PDBTitle: ternary complex of mlc1p bound to iq2 and iq3 of myo2p, a class v2 myosin
23c5gpdB_



not modelled 7.6 31
PDB header:dna binding protein
Chain: B: PDB Molecule:sterol regulatory element-binding protein 1;
PDBTitle: crystal structure of the binding domain of srebp from fission yeast
24c2vfvA_



not modelled 7.6 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:xylitol oxidase;
PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite
25c3bw7A_



not modelled 7.5 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytokinin dehydrogenase 1;
PDBTitle: maize cytokinin oxidase/dehydrogenase complexed with the allenic2 cytokinin analog ha-1
26c3witA_



not modelled 6.8 50
PDB header:structural protein
Chain: A: PDB Molecule:putative vgr protein;
PDBTitle: crystal structure of the c-terminal region of vgrg1 from e. coli o1572 edl933
27c6u7hB_



not modelled 6.7 16
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-em structure of the hcov-229e spike glycoprotein
28c6b15A_



not modelled 6.3 63
PDB header:sugar binding protein
Chain: A: PDB Molecule:amy13k;
PDBTitle: crystal structure of cbmbc (family cbm26) from eubacterium rectale2 amy13k
29c6dlmA_



not modelled 6.1 70
PDB header:de novo protein
Chain: A: PDB Molecule:dhd127_a;
PDBTitle: dhd127
30c6l08B_



not modelled 6.0 40
PDB header:metal binding protein
Chain: B: PDB Molecule:cytidine deaminase 1;
PDBTitle: crystal structure of arabidopsis cytidine deaminase
31c2ev2B_



not modelled 5.9 24
PDB header:lyase
Chain: B: PDB Molecule:hypothetical protein rv1264/mt1302;
PDBTitle: structure of rv1264n, the regulatory domain of the mycobacterial2 adenylyl cylcase rv1264, at ph 8.5
32d1ihoa_



not modelled 5.9 41
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
33d1hssa_



not modelled 5.9 33
Fold:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Superfamily:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Family:Proteinase/alpha-amylase inhibitors
34c5d2hA_



not modelled 5.9 17
PDB header:lyase
Chain: A: PDB Molecule:4-oxalocrotonate decarboxylase nahk;
PDBTitle: 4-oxalocrotonate decarboxylase from pseudomonas putida g7 - complexed2 with magnesium and alpha-ketoglutarate
35c7cc9C_



not modelled 5.8 19
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:hnhc domain-containing protein;
PDBTitle: sulfur binding domain of sprmcra complexed with phosphorothioated dna
36c3cwfA_



not modelled 5.8 64
PDB header:transferase
Chain: A: PDB Molecule:alkaline phosphatase synthesis sensor protein phor;
PDBTitle: crystal structure of pas domain of two-component sensor histidine2 kinase
37d1i27a_



not modelled 5.8 63
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:C-terminal domain of the rap74 subunit of TFIIF
38c2vkyB_



not modelled 5.8 10
PDB header:viral protein
Chain: B: PDB Molecule:tail protein, piigcn4;
PDBTitle: headbinding domain of phage p22 tailspike c-terminally fused to2 isoleucine zipper piigcn4 (chimera i)
39c3ag5A_



not modelled 5.3 21
PDB header:ligase
Chain: A: PDB Molecule:pantothenate synthetase;
PDBTitle: crystal structure of pantothenate synthetase from staphylococcus2 aureus
40c6qtiB_



not modelled 5.2 24
PDB header:membrane protein
Chain: B: PDB Molecule:nicotinamide nucleotide transhydrogenase;
PDBTitle: structure of ovine transhydrogenase in the presence of nadp+ in a2 "double face-down" conformation

Binding site prediction 

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