Phyre Home Retrieve Phyre Job Id
Emailhurlbertj@winthrop.edu
DescriptionASR85460.1_hypothetical_protein_SEA_CAIN_61_[Mycobacterium_phage_Cain]
DateMon Jun 7 16:50:03 BST 2021
Unique Job IDa66f857893246aee
SequenceMSAIRRKSTT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:18.101 Y:45.184 Z:33.821
Model (left) based on template c6urfB_
Top template information
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme;
PDBTitle: malic enzyme from mycobacterium tuberculosis
Confidence and coverage
Confidence: 44.7% Coverage: 44%
47 residues ( 44% of your sequence) have been modelled with 44.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6urfB_



44.7 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme;
PDBTitle: malic enzyme from mycobacterium tuberculosis
2d1u6ra2



20.7 23
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Guanido kinase catalytic domain
3d1d4ca2



15.3 50
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
4c3ktyA_



15.3 25
PDB header:transferase
Chain: A: PDB Molecule:probable methyltransferase;
PDBTitle: crystal structure of probable methyltransferase from bordetella2 pertussis tohama i
5c2ha8A_



14.8 50
PDB header:rna binding protein
Chain: A: PDB Molecule:tar (hiv-1) rna loop binding protein;
PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1
6d1oxxk1



14.4 20
Fold:OB-fold
Superfamily:MOP-like
Family:ABC-transporter additional domain
7d1p30a1



14.4 33
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Group II dsDNA viruses VP
Family:Adenovirus hexon
8d1p2za1



14.2 33
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Group II dsDNA viruses VP
Family:Adenovirus hexon
9c3ic6A_



13.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative methylase family protein;
PDBTitle: crystal structure of putative methylase family protein from neisseria2 gonorrhoeae
10c6ahwB_



13.7 50
PDB header:transferase
Chain: B: PDB Molecule:circular-permutated trna (cytidine(34)-2'-o)-
PDBTitle: crystal structure of circular-permutated yibk methyltransferase from2 haemophilus influenzae
11d1crka2



13.7 23
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Guanido kinase catalytic domain
12c6xfjA_



13.0 67
PDB header:protein transport
Chain: A: PDB Molecule:type 3 secretion system pilotin;
PDBTitle: crystal structure of the type iii secretion pilotin invh
13c4pzkA_



12.7 50
PDB header:transferase
Chain: A: PDB Molecule:trna (cytidine(34)-2'-o)-methyltransferase;
PDBTitle: crystal strucrure of putative rna methyltransferase from bacillus2 anthracis.
14c6qkvA_



12.2 50
PDB header:transferase
Chain: A: PDB Molecule:trna (cytidine(34)-2'-o)-methyltransferase;
PDBTitle: structure of yibk from p. aeruginosa
15c5kzkA_



12.1 50
PDB header:rna binding protein
Chain: A: PDB Molecule:probable rna methyltransferase, trmh family;
PDBTitle: crystal structure of rrna methyltransferase from sinorhizobium2 meliloti
16c4x3mB_



11.4 75
PDB header:transferase
Chain: B: PDB Molecule:rna 2'-o ribose methyltransferase;
PDBTitle: crystal structure of ttha0275 from thermus thermophilus (hb8) in2 complex with adenosine in space group p212121
17c4cndB_



10.6 25
PDB header:transferase
Chain: B: PDB Molecule:trna (cytidine/uridine-2'-o-)-methyltransferase trmj;
PDBTitle: crystal structure of e.coli trmj
18c3gyqB_



10.2 42
PDB header:transferase
Chain: B: PDB Molecule:rrna (adenosine-2'-o-)-methyltransferase;
PDBTitle: structure of the thiostrepton-resistance methyltransferase2 s-adenosyl-l-methionine complex
19d1v2xa_



10.1 42
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
20c2bviK_



9.9 33
PDB header:virus
Chain: K: PDB Molecule:hexon protein;
PDBTitle: the quasi-atomic model of human adenovirus type 52 capsid (part 2)
21d2ja9a1



not modelled 9.9 50
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
22c3onpA_



not modelled 9.6 25
PDB header:transferase
Chain: A: PDB Molecule:trna/rrna methyltransferase (spou);
PDBTitle: crystal structure of trna/rrna methyltransferase spou from rhodobacter2 sphaeroides
23d1m15a2



not modelled 9.4 24
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Guanido kinase catalytic domain
24c3zifD_



not modelled 9.1 33
PDB header:virus
Chain: D: PDB Molecule:hexon protein;
PDBTitle: cryo-em structures of two intermediates provide insight into2 adenovirus assembly and disassembly
25c1x7pB_



not modelled 9.0 58
PDB header:transferase
Chain: B: PDB Molecule:rrna methyltransferase;
PDBTitle: crystal structure of the spou methyltransferase avirb from2 streptomyces viridochromogenes in complex with the cofactor adomet
26c3e5yB_



not modelled 9.0 58
PDB header:transferase
Chain: B: PDB Molecule:trmh family rna methyltransferase;
PDBTitle: crystal structure of trmh family rna methyltransferase from2 burkholderia pseudomallei
27c2xdhA_



not modelled 8.9 41
PDB header:cell adhesion
Chain: A: PDB Molecule:cohesin;
PDBTitle: non-cellulosomal cohesin from the hyperthermophilic2 archaeon archaeoglobus fulgidus
28c1ipaA_



not modelled 8.8 67
PDB header:transferase
Chain: A: PDB Molecule:rna 2'-o-ribose methyltransferase;
PDBTitle: crystal structure of rna 2'-o ribose methyltransferase
29c5gm8A_



not modelled 8.6 33
PDB header:transferase
Chain: A: PDB Molecule:trna (cytidine/uridine-2'-o-)-methyltransferase trmj;
PDBTitle: methylation at position 32 of trna catalyzed by trmj alters oxidative2 stress response in pseudomonas aeruiginosa
30c1plpA_



not modelled 8.1 88
PDB header:membrane protein
Chain: A: PDB Molecule:phospholamban;
PDBTitle: solution structure of the cytoplasmic domain of2 phospholamban
31c2i6dA_



not modelled 8.0 50
PDB header:transferase
Chain: A: PDB Molecule:rna methyltransferase, trmh family;
PDBTitle: the structure of a putative rna methyltransferase of the trmh family2 from porphyromonas gingivalis.
32c2inyA_



not modelled 7.9 33
PDB header:viral protein
Chain: A: PDB Molecule:hexon protein;
PDBTitle: nanoporous crystals of chicken embryo lethal orphan (celo) adenovirus2 major coat protein, hexon
33d1ipaa1



not modelled 7.7 67
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
34c4cngB_



not modelled 7.5 17
PDB header:transferase
Chain: B: PDB Molecule:spou rrna methylase;
PDBTitle: crystal structure of sulfolobus acidocaldarius trmj in2 complex with s-adenosyl-l-homocysteine
35c2ja9A_



not modelled 7.5 50
PDB header:rna-binding protein
Chain: A: PDB Molecule:exosome complex exonuclease rrp40;
PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40
36d1gz0a1



not modelled 7.5 31
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
37c1zjrA_



not modelled 7.3 50
PDB header:transferase
Chain: A: PDB Molecule:trna (guanosine-2'-o-)-methyltransferase;
PDBTitle: crystal structure of a. aeolicus trmh/spou trna modifying enzyme
38d1mxia_



not modelled 7.3 50
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
39c2je6I_



not modelled 7.1 42
PDB header:hydrolase
Chain: I: PDB Molecule:exosome complex rna-binding protein 1;
PDBTitle: structure of a 9-subunit archaeal exosome
40c1gz0G_



not modelled 7.0 31
PDB header:transferase
Chain: G: PDB Molecule:hypothetical trna/rrna methyltransferase yjfh;
PDBTitle: 23s ribosomal rna g2251 2'o-methyltransferase rlmb
41c2nn6H_



not modelled 6.9 39
PDB header:hydrolase/transferase
Chain: H: PDB Molecule:exosome complex exonuclease rrp4;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
42d1kk8a1



not modelled 6.9 33
Fold:SH3-like barrel
Superfamily:Myosin S1 fragment, N-terminal domain
Family:Myosin S1 fragment, N-terminal domain
43c5flgA_



not modelled 6.4 29
PDB header:ligase
Chain: A: PDB Molecule:6-carboxyhexanoate--coa ligase;
PDBTitle: crystal structure of the 6-carboxyhexanoate-coa ligase (biow)from2 bacillus subtilis in complex with amppnp
44c1gz0H_



not modelled 6.3 33
PDB header:transferase
Chain: H: PDB Molecule:hypothetical trna/rrna methyltransferase yjfh;
PDBTitle: 23s ribosomal rna g2251 2'o-methyltransferase rlmb
45d2nn6g1



not modelled 6.2 50
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
46c3qkbB_



not modelled 6.2 29
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein with unknown function which belongs to2 pfam duf74 family (pepe_0654) from pediococcus pentosaceus atcc 257453 at 2.73 a resolution
47c2mfzA_



not modelled 5.9 50
PDB header:structural protein
Chain: A: PDB Molecule:minor ampullate spidroin;
PDBTitle: nmr structure of c-terminal domain from a. ventricosus minor ampullate2 spidroin (misp)
48c5co4A_



not modelled 5.8 50
PDB header:transferase
Chain: A: PDB Molecule:putative trna (cytidine(34)-2'-o)-methyltransferase;
PDBTitle: structural insights into the 2-oh methylation of c/u34 on trna
49c5ikjB_



not modelled 5.8 70
PDB header:transcription
Chain: B: PDB Molecule:cryptic loci regulator protein 1;
PDBTitle: structure of clr2 bound to the clr1 c-terminus
50c3izxE_



not modelled 5.7 39
PDB header:virus
Chain: E: PDB Molecule:viral structural protein 5;
PDBTitle: 3.1 angstrom cryoem structure of cytoplasmic polyhedrosis virus
51c3iz3D_



not modelled 5.7 41
PDB header:virus
Chain: D: PDB Molecule:viral structural protein 5;
PDBTitle: cryoem structure of cytoplasmic polyhedrosis virus
52c6d6rH_



not modelled 5.3 39
PDB header:hydrolase
Chain: H: PDB Molecule:exosome complex component rrp4;
PDBTitle: human nuclear exosome-mtr4 rna complex - composite map after focused2 reconstruction
53c4ifdG_



not modelled 5.2 50
PDB header:hydrolase/rna
Chain: G: PDB Molecule:exosome complex component rrp40;
PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna

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